I have a series of protein models with DNA docked. I now want to superpose the DNA on a reference DNA molecule and extract the translational distance applied and the rotation angle used.
I can superpose DNA molecules with Chimera, but I can't extract the translational distance and the rotational angle that was applied to superpose.
I have also had a look at MODELLER but it seems MODELLER cannot not superpose DNA.
Does anyone know of software/code by which I can extract the information I want?