The use of methods from the physical sciences to aid in the study of biological systems.

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126 views

Effect of pupil responses on the electroretinogram

The electroretinogram (ERG) is generally considered to reflect the retinal processing of a light stimulus, typically a photoreceptor response followed by secondary neuronal activity. I am wondering ...
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50 views

Why do most organisms have negative supercoiled DNA?

It has been observed that in nature most organisms have negative supercoiled DNA and that few organisms have positive supercoiled DNA. Some of the organisms that have the positive supercoiled DNA live ...
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33 views

How to get a pdb file of a single atom?

I am trying to get a pdb file that contains a single atom, it doesn't matter if it's Hydrogen or another atom. How can I obtain this? Are there any pdb files with just a single atom available to ...
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13 views

How can the directionality of a protein structure be defined?

For a DNA molecule, you can define directionality using the convention of a 5'-3' direction on the Sense strand. However, using an N to C convention for a protein doesn't work since the ends may be on ...
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26 views

Criteria for electrophysiological threshold

As opposed to action potential thresholds (which are yes/no events), electrophysiological thresholds of compound action potentials are arbitrary. Mostly a certain noise level is picked and when the ...
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34 views

Unexpected stoichiometry n in ITC experiments

I'm looking at the binding of a small molecule to several RNA constructs and tried to determine the binding constants. To do this I've performed a few ITC experiments on this system, the results were ...