The study of cells: their physiological properties, structure, environmental interaction, division, life cycle, and death, as well as the organelles they contain. Also known as cytology.

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epitope prediction/ mapping

B-CELL EPITOPE PREDICTION Regarding this article: "Such a molecule can be synthesized or, in case of a protein, its gene can be cloned into an expression vector."----- is a particular line in ...
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2answers
41 views

Regarding cellular self-destruction

I heard and read telomere 'health' or 'length' ( if that's right ) has alot to do with cell 'health'. If telomere 'abilities' are 'restored' to a 'healthier' status then the cell it is in functions as ...
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750 views

Why doesn't the cell membrane just… break apart?

Forgive me if this is a silly question. I can't understand the basics. Why doesn't the membrane just... break apart? What's keeping the layers in the phopholipid bilayer together? I know that the ...
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1answer
67 views

What is hTAP?? Please help [closed]

Could not find a single article regarding this. What is hTAP? Tap is Transfer associated protein, that I know, but what is hTAP??(I have not studied biology since last 8 years and now I am going ...
2
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1answer
403 views

Difference between sequential and conformational epitope

Is the difference only in its structure? Like conformational epitope has 3D structure while sequential has a linear structure?(I have not studied biology since last 8 years and now I am going through ...
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2answers
464 views

What is MHC haplotype?

What is MHC haplotype? I did check out the wiki article, but did not understand. (I have not studied biology since last 8 years and now I am going through it because I need it for my research. So if ...
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1answer
64 views

MHC restricted peptide

What is an MHC restricted peptide? I got this definition from wikipaedia, but cannot exactly extract what the phrase MHC restricted peptide means. MHC-restricted antigen recognition, or MHC ...
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2answers
715 views

Does “Garbage Enzyme cleaner” contain cleaning enzymes?

There are many recipes which call for using fruit peel fermentation process to make a concentrated enzyme cleaner solution, some variations call to add bakers yeast. So the question arises that does ...
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2answers
40 views

How does one determine intracellular concentration?

The TL;DR version Is there a fast way to determine what the cell environment of a particular cell (E.g RBC) is? (in terms of solute/ionic concentration) I'm not sure if the question belongs here, ...
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2answers
64 views

Are there known downsides to removing UV mutation hotspots to prevent some skin cancers (Genetic sunblock)?

Khavari et al. recently demonstrated that a significant fraction of one of the major forms of skin cancer (cutaneous squamous cell carcinomas) are associated with a mutated KNSTRN gene (a protein ...
3
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1answer
112 views

Integration of several environmental signals

I am looking for examples of different functions that are good fit to how signals are computed in order to respond to the environment. Let's make my question more copmrehensible with an example... ...
3
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1answer
67 views

SEREX serological analysis of cDNA expression library

What is Serological Analysis of cDNA expression library? I went through this article:http://cancerimmunity.org/serex/introduction/ but could not really make out. Can someone please explain this to me ...
2
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1answer
70 views

How does core-conductor model correspond to an actual neuron?

Hi guys, looking at your average neuron, it is very difficult for me to imagine how this could be translated into a core-conductor model On the neuron above, where would be the intracellular ...
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1answer
1k views

Complementarity Determining Regions (CDR)

Complementarity determining regions (CDRs) are part of the variable chains in immunoglobulins (antibodies) and T cell receptors, generated by B-cells and T-cells respectively, where these molecules ...
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1answer
34 views

Degenerate Alignment Analysis

Can someone please tell me what is Degenerate alignment analysis? Could not find a good article on the internet that could help me understand what it means? (I have not studied biology since last 8 ...
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0answers
31 views

TAA- Tumor associated antigen [duplicate]

An approach to find Tumor associated antigens is based on transfection of expression library made from cDNA into cells expressing desired MHC haplotypes. Can someone please explain what this line ...
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1answer
24 views

Microarray probe and target

In a microarray, which one is called a target and which one is the probe? the one that is added later , is that the probe or the one present in the slots of the microarray, that is the probe? (I have ...
2
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1answer
41 views

What roles do cyclooxygenase, lipoxygenase, and epoxygenase have in signal transduction? [closed]

Besides oxidizing fatty acids to form prostglandins, leukotrienes, and epoxides, what other roles do cyclooxygenase, lipoxygenase, and epoxygenase have in signal transduction?
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2answers
44 views

How is it that ionic diffusion is independent of other ions?

This question arises from the explanation of what the resting potential of a cell membrane is. In the Goldman formula, there is no interaction between different ion types. If diffusion is caused by ...
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1answer
117 views

Are retroviruses cytotoxic?

There are typically hundreds of retroviruses found in healthy human beings. Are retroviruses then cytotoxic? (In other words, are they able to kill or damage other cells).
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1answer
75 views

How to measure the total number of cells in an average human body?

I have got one assignment to calculate the approximate sum total of all cells in the human body. How to tackle this problem? I know that the current statistics is $10^{13}$ cells. I wanted some hints. ...
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1answer
101 views

How to estimate the DNA density in human sperm head? [closed]

I have got an estimate of sperm head volume from internet.Like consider it as a disk of order 4-5µm. Now I wanted to find the DNA density in the sperm head. How to find that?
3
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0answers
42 views

What does the term 'epitope mapping' mean? [closed]

Epitope mapping means identifying the binding site of antibodies on the target antigen. This means that the site to be identified is part of the antigen and not antibody, am I right?
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1answer
116 views

What is the functional significance of the difference in cardiolipin/cholesterol ratio in different membranes?

I have read somewhere that the plasma membrane has little cardiolipin but excess cholesterol whereas the inner mitochondrial membrane is rich in cardiolipin and has little cholesterol.I just wanted to ...
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2answers
161 views

positive and negative feedback

I want to know more about positive feedback in gene regulation and to know the similarity and differences between positive and negative feedbacks.
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1answer
405 views

Mitochondria - are they really separate organisms that once merged into eukaryotic cells?

Theoretically, mitochondria are said to be a separate organism that is concerned with its own life and its own processes. In fact, it even duplicates individually. I know a similar question is here ...
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1answer
223 views

Can a bacteriophage be used to treat bacterial diseases?

Some bacteriophages reproduce using the lytic cycle which ends with the destruction of the host bacterial cell. I was wondering if theoretically this could be used theraputically to treat bacterial ...
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2answers
41 views

Concentration dependent cellular processes

Are there any famous biological processes that depend strongly on a chemical concentration reaching a particular value, like some sort of switch? E.g. if concentration of chemical x reaches ...
5
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2answers
4k views

Why was the Davson-Danielli model rejected?

According to my textbook, Davson-Danielli's model of a phospholipid bilayer sandwiched between two layers of globular protein was incorrect. The nonpolar protein portions would separate the polar ...
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3answers
6k views

DNA is charged negative. Where is all the positive charge in my body?

DNA is charged negative because of its phosphate backbone. Since charges need to be balanced (so that there are no charges building up somewhere), what is the positive charge which neutralizes this ...
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4answers
125 views

Why is too much glucose harmful?

I learned the citric acid cycle in biotechnology school and how cells work; about ADP and ATP and how the Cellular respiration (C6H12O6 + 6O2 -> 6CO2+6H2O) works. I am interested in understanding why ...
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2answers
203 views

Breakdown of energy expenditure at the level of a single cell

The metabolic rate measures how much energy an organism expends over a unit of time. Its breakdown for the human body in terms of its functions is well documented : so much for the heart, for the ...
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1answer
266 views

Has anyone used Crispr/Cas to induce a knock-in in MEF cells?

Does anyone have experience with the crispr/cas9 platform performed on MEF? Or does anyone recall any relevent articles? Thanks
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1answer
830 views

RNeasy Mini Kit low 260/230 ratio — can I purify this RNA for further use?

I used Qiagen's RNeasy Mini Kit to isolate RNA from 5*10^5 C28/I2 (immortalized human chondrocytes). However, my yield is low (~25 ng/ul), but my 260/280 ratio is great (~2.3), and my 260/230 ratio is ...
2
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1answer
118 views

Inductance in cell

In an animal cell, especially neuron and in particular its axon, while there is electrical resistance and capacitance mechanism in the cell, which play essential roles in the cable theory model of ...
2
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1answer
63 views

What is the role of lamellar bodies in lung cells?

Lamellar bodies have been found to be secreted in lung cells many of their associated proteins have been identified. What is the current consensus or research on the function that these lamellar ...
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2answers
115 views

How can you explain the origin of life out of nonliving matter (abiogenesis)? [closed]

According to biochemist Robert Shapiro, the "primordial soup" theory is as follows: Early Earth had a chemically reducing atmosphere. This atmosphere, exposed to energy in various forms, produced ...
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1answer
47 views

Regarding signalling pathways

Do all signalling pathways have something that can inhibit them? If the signal pathway is benefitial and it is inhibited would the inhibitor be caused by a biological problem? Are all inhibitors ...
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1answer
45 views

How long does it take for a cell to synthesize an enzyme?

Where can I find data regarding the times distinct cells take to synthesize distinct enzymes?
4
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2answers
126 views

Database of Multicellular and Unicellular organisms?

I'm trying to annotate a list of organisms taken from NCBI for cellularity (unicellular or multicellular). Does any of you ever found a database with association between an organisms' name or taxa and ...
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1answer
49 views

Anaphase Microtubule Disassembly

Centromeres move toward the poles as the microtubules that connect them shorten. This shortening is due to the removal of tubulin subunits from the kinetochore ends of the microtubules. I'm confused ...
2
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1answer
72 views

Can (any) human cells learn?

I'm not talking about single celled organisms, but actual cells in your body. Is there any evidence that they can learn to, say, navigate an environment or avoid an aversive stimulus like an animal ...
2
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1answer
406 views

How do some plants grow in salt water, while others die?

My question is basically out of curiosity and comes from observing how certain plants (such as mangroves or salt cedar) can grow in seawater. If this gives the plant an advantage, why haven't all ...
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2answers
69 views

Has an artificial symbiotic relationship ever been created?

Have 2 organisms ever been introduced to create a symbiotic relationship that doesn't occur in their natural environment?
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2answers
156 views

Can botulinum toxin be grown or kept from denaturing in an UNWRAPPED 50 pound hay bale?

Botulinum toxin is the neurotoxin protein created when botulism spores grow. The requirements for growth and/or for keeping the toxin from denaturing would seem to be very difficult to create in bale ...
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1answer
75 views

How do penicillin resistant bacteria grow slower in the presence of penicillin?

We put 2 flasks inoculated with Bacillus cereus in 37⁰C: one with 100μg/ml penicillin + 50μg/ml chloramphenicol and the other without penicillin. We found that the OD is higher in the one without the ...
4
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2answers
128 views

A photosynthesizing mouse?

N. Shubin's Your Inner Fish makes the point several times that there is a lot of functional similarity between some seemingly remote gene cousins. If that needed reinforcing we have the spider-goat, ...
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2answers
98 views

Cancer growth and cell division [closed]

I am confused about the prerequisites for cell division and cancer. Which of the following is necessary for the cell cycle to progress? Hormones Growth factor Cyclins Cyclin dependent kinases ...
2
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1answer
61 views

Trimming of tRNA precursors

From Molecular Biology of the Cell (4th edition) by Bruce Alberts et al. (Chp 6, Pg 338) : Both bacterial and eucaryotic tRNAs are typically synthesized as larger precursor tRNAs, and these are ...
2
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1answer
140 views

What cells don't have a primary cilium?

It is often stated that most cells in the human body have a primary cilium. Which ones don't? For which cells is it unknown?