Genetics is the branch of biology that deals with the transmission and variation of inherited characteristics.

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Fisher's Geometric Model for Dummies

Fisher's geometric model is still today one of the most important and fundamental model in evolutionary biology but it seems to me that most student in evolutionary biology don't really understand it ...
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An unknown band appearing in my gel electrophoresis

I am having trouble understanding what is the source of band "2" in the following gel-electrophoresis: In this experiment, we took an E.coli transformant colony and ran its nucleic acids in the ...
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Why aren't introns found on the ends of pre-RNA?

We recently learned in genetics class that exons always cap the ends of nascent RNA. I have been trying to figure out the reason why introns can't instead be found on the ends instead of exons. The ...
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54 views

What is the point of DNA sequencing?

This is a very very basic question. I've looked at methods such as chromosome sequencing and shotgun sequencing. Wikipedia says that: ...
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32 views

Why do we use DNA sequencing methods such as shotgun?

I am learning about DNA cloning for the first time. What I understand is that, in order to clone DNA, we break-up the original gene into shreds. Then try to piece it back together. Why exactly do we ...
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Do the eggs for larger litters come from the same meiosis events, or different ones?

There are some species of animals that give birth to more than one pup at a time. In these species, are the fertilized eggs all from one or a limited group of meiosis processes, or are they from ...
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Components of the concept of Developmental Noise?

Developmental noise is a concept that correspond to the amount of possible phenotypic variance of a given genotype in a given environment. Intrinsic noise (aka Cellular noise) is a component of ...
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26 views

What is the protein used in retrotransposon in human?

I was wondering what protein is used in human for reversely transcribing the RNA intermediate to DNA in human being. and another Q is that what kind of cell produce this protein and when will it be ...
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20 views

Segregation Analysis for predicting age-specific cancer risk

I am relatively new to the world of genetics research and have been tasked with presenting to my lab the potential value of a paper that uses Complex Segregation Analysis for a risk analysis. The hope ...
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40 views

Influence of temperature on protein binding and decay rates

For computer modeling purposes, I am looking for some referenced quantitative measurements of the effect(s) of temperature on the dynamic of biochemical reactions. Question In particular, my ...
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39 views

Trisomy 21 XXY & X-inactivation

I read that X-inactivation doesn't tend to happen in males, but then when someone is XXY, they are a male because of the Y. However these individuals tend to live. So does that mean that ...
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55 views

Is the mutation rate in organisms in general consistent over the genome?

Coming from computer science with an interest in genetic programming (a process emulating evolution) I'm curious about whether the rate of mutation is homogeneous across the whole genome, or if some ...
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Influence of temperature on transcription, protein binding and decay rates

I am the kind of biologist who doesn't know much about molecular genetics and about the dynamic of biochemical reactions. Question My question concerns the influence of temperature on the dynamic of ...
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11 views

Stress-responding enhancer?

I wonder if anyone knows a well characterized human enhancer which has been shown increased activity (in e.g. reporter assays) under stressed conditions, such as DNA damage, hypoxia, ...
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21 views

Chromatids in metaphase?

Please see the following picture: In my book, the author claims that these chromosomes are in metaphase (a metaphase stopped by cholchicin). I don't understand why they don't have two ...
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41 views

Is epilepsy more heritable from maternal side?

I am thinking if paternal or maternal genetic line is the risk factor. Mitochondrial DNA is coming from maternal line. I do not know the pathogenesis of epilepsy so well that I could answer my ...
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99 views

Collective name for the X- and Z-chromosomes

Chromosomes are grouped as sex chromosomes or autosomes, with the X, Y, Z and W all falling in to the former category. The Z and X are present both in the homogametic and heterogametic sexes, and the ...
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Microsatellite shifts (peak calling) GeneMapper! Thesis help!

I'm a masters student attempting to conduct a parentage analysis on a population of fish for my thesis. My advisor and post-docs haven't been very helpful, so I need some help! I have dinucleotide ...
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Does the Y chromosome carry structural information, or only switches + traceable ID?

The Y chormosome almost doesn't crossover with the X chromosome, and so the evolution of anything it encodes must be much slower, because by the Hill–Robertson effect beneficial mutations must occur ...
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what is the modern, molecular explanation of independent assortment of alleles?

in case it isn't obvious i'll begin by stating that i'm a layman, trying to understand something about this subject from reading books. the books i've looked at so far give murky and confusing ...
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42 views

How do I interpret this graph regarding introduced genes and virus-infected cells?

This graph appeared in a practice test for the MCAT. I am trying to interpret it, but it confuses me a bit. On the x-axis we have some introduced genes, and on the y-axis we have % of cells ...
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77 views

What is the reproductitive advantage of grey-haired humans

A vast majority of humans get at least some grey hair as they age. AFAIK this applies to both genders and all races. Presumably this means that at least some grey haired humans have noticeable ...
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84 views

(How) can a pink grasshopper exist?

I saw this foto on Reddit recently: Is this possible? How can a grasshopper become like this? Is this just natural genetic mutation?
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sex limited genome transmission

In general, for dioecious species, a large portion of the genome passed from parents to offspring of both sexes - in mammals the X-chromosomes and autosomes are passed from a mother to both daughters ...
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A Genetic linkage problem [closed]

I have recently switched from electronics to computational biology. So having some hard time with my homeworks. Can someone guide me on this problem? Consider 6 genes A, B, C, D, E, F, G. Some ...
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How was the cama's life expectancy computed?

A cama is a hybrid between a male dromedary camel and a female llama. The first cama was born on January 14, 1998, yet on the Wikipedia page it is said that a cama's life span is 30–40 years. How was ...
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Why do oncogenes show genetic dominance?

As we know that tumor suppressor gene causes cancer only when both the alleles are recessive in nature.But in case of oncogenes if only one allele is dominant it can cause cancer.Why in case of ...
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Genetically modified Klebsiella Planticola nearly bulldozers plant life as we know it?

The article "The Bacterium That (Almost) Ate the World" by Elaine Ingham (see also here or here) describes a genetically modified bacterium that would break down cellulose plant matter into alcohol: ...
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58 views

What is the purpose of DNA? [closed]

My very basic understanding is DNA gets transcribed into RNA by effectively replacing thymine with uracil, then RNA is translated to make proteins. Looking at it from an engineering perspective, it ...
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X-inactivation in ovaries

Background In all eutherian (mammals excluding the marsupials), the female (who is $XX$ for the pair of sexual chromosomes) inactivates one of her $X$. This is called dosage compensation. This ...
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How do I read a sequence logo?

I'm looking at a paper that uses several sequence logos to illustrate the consensus sequence of certain sites. Here is the most important of the sequence logos I'm interested in: The explanations ...
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“Same” DNA vs genes

It is often cited that humans share 99% (or 98%) of their DNA with chimpanzees. On the other hand it is stated that siblings share only half of their genes. What (if any) is the difference between ...
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How to track and describe the evolution of a gene?

So I have a project student (undergraduate) who has been assigned a project to study the evolution of a gene (and possibly related genes) through species. I am not an evolutionary biologist, and hence ...
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43 views

What is wrong with this analogy: Individuals are to alleles what governments are to individuals

I'm an amateur when it comes to genetics, I'm hoping to learn something from the corrections. I am taking epigenetics into account (kind of); all 3 entities are susceptible to external physical ...
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29 views

Periods of Heavy Speciation

I have a set of microRNA ages with corresponding labels suggesting which clade they first emerged from. For instance, for hsa-mir-1, let's say, it would have an age of Eutheria. I have several peaks ...
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Botany related Genetically improved Leucaena leucocephala seeds

I am looking for a fast growing Leucaena leucocephala seeds. Now, I am cultivating Leucaena leucocephala which can grow 6.00 Meters in a year. But I am looking for a genetically improved seeds which ...
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118 views

Is there some genetic variance underlying music appreciation?

Is there any research done on the genetic variance for Music appreciation? If not, why is there no genetic variance for this trait?
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Is it possible to genetically modify a plant at home?

Would I be able to genetically modify a plant at home? What equipment will be necessary? I think it might be a fun change from the 'norm'. Are some plants easier to modify than others?
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Horizontal gene transfer versus convergent evolution

There are several often noted examples of convergent evolution (eyes, bat/bird wing evolution etc.) How do we rule out horizontal gene transfer in these cases?
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Schedules of mating for men

It’s simple deductive logic to follow that for a species to survive it must provide it’s offspring with the best possible conditions to ensure it’s survival – either that or to reproduce in such ...
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Turning publicly available genome data into proteins

I'm a computer scientist who is starting to dabble with biology. My eventual goal is to model different kinds of cells with a computer program. As of right now, I'm just trying to take some smaller ...
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coevolution by physical interaction between RNA sequences

There are several items that relate to the concerted evolution between pairs of sencuencias (especially structural) rRNA as a consequence of physical interaction in tertiary, or even quaternary ...
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detection of primary origin (natural selection or genetic drift) on alterations in sequences

I recently had a question about how to distinguish the origin of variations in the sequences of rRNA as to whether alterations are generated by genetic drift or natural selection. For me it has not ...
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How did the Chromosome #2 Fusion propagate?

There is strong evidence that chromosome 2 in humans is a fusion of two chromosomes of a common ancestor of chimps and humans as explained at wikipedia here Was it necessary for the common ancestor ...
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does order of genes in a chromosome matter?

does the order of genes within a chromosome matter? or is the main thing that the genes are there. so for example, our DNA is very similar to that of apes not only by the genes themselves but also by ...
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34 views

regarding genetic disorders related to protein production

I am not completely familiar with biology, but i had a genetics course in college along with practicals. Forgive me if there is something wrong with my question. Is there a genetic disease which ...
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60 views

what is the biggest known functional distance between an enhancer and its target gene (TSS) in cis?

since the title seems self explanatory; It would be nice if anybody could provide a reference. I'm looking for a paper that I belive stated around 1.5 Mb but anything above will be cordialy welcomed. ...
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can recessive alleles produce codominance?

Maybe I'm confused by the term "codominance", but I wondering if codominance only occurs with two dominant alleles. Can two recessive alleles produce codominance in an individual? Likewise, can two ...
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62 views

Convert gene name to uniprot ID

i have a list of gene name in a file CHRNB2 EGR2 GCK KRT14 LMNA FGF3 TK2 ABCC8 How can I map them to uniprot ID ? P.S I tried Uniprot "ID mapping" ...