The set of chemical reactions that happen in the cells of living organisms to sustain life.

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What is the relationship between protein-protein interaction networks and metabolic networks? [closed]

I am trying to find out how these networks can be linked together. I know that Protein-protein interaction networks and metabolic networks both fall under the Intra-cellular type of biological ...
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2answers
345 views

Is lemon water an alkalizing agent in the body?

I was recently having a discussion with someone about whether lemon water actually increases the pH of your body (by which I assume they mean the blood); their claim was that once Citric acid was ...
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48 views

How does it make thermodynamic sense for photosynthesizers to turn CO₂ into O₂?

My understanding is that animal metabolism consists of exothermic reactions like $$\ce{C6H12O6 + 6 O2 ->6 CO2 + 6 H2O + energy}$$ This makes thermodynamic sense to me. Animals need an exothermic ...
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0answers
37 views

Why do plants produce so much more sugar than they use?

I recently asked the question, "Do plants need O2 to consume energy they've stored via sugar?" to which @canadianer responded, "Yes, plants require oxygen to generate ATP from sugar. However, they ...
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23 views

Do plants need O₂ to consume energy they've stored via sugar?

This question came up as I work my way through the answers to another question I just asked. My understanding is that plant photosynthesis looks something like this (though with lots more going on ...
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2answers
306 views

Why are there so many medicinal plants?

Here is wikipedia page containing a list of plants used in herbal medicine. One might first want to argue that many of them actually do not have any medicinal/beneficial effect on heatlth. I think we ...
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1answer
23 views

Metabolism of different saccharides

Learning about carbohydrates, I wonder what the differences there are in terms of metabolism, and overall health between the different types of saccharides. In other words, does the body use ...
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62 views

Why is iodine used for metabolic hormones?

Iodine and related biological iodine-carrying hormones are phylogenetically very old, at least according to Wikipedia. Humans use iodine as a metabolic indicator, as do axolotls and apparently most ...
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257 views

During famine, does the human body do anything to prioritize which organs receive nutrients?

When food is scarce, the body slows its metabolism. Are there any other systems or processes that encourage prioritization of organs?
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29 views

How to measure heat loss in Tardigrades

I want to measure metabolism in tardigrades (a jar of 30 tardigrades). I know that an easy way to measure metabolism is heat loss; I can just measure the temperature of the water before and after a ...
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15 views

Which biosynthetic pathways take place in the plastid and were are they located?

I know that the isoprenoid, jasmonate, glucosinolate, fatty acids, chlorophyll, starch, and aromatic amino acid syntheses are located in the plastid. But I don't know if they are located in the ...
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31 views

Does the metabolic rate determine how fast the telomeres shorten?

In many papers one can read that telomeres may play an important role in longevity. According to Calado et al.1 the telomeres of mice are much longer than the telomeres of humans. However, mice have ...
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87 views

How did people who were living far from the sea obtain iodine during the Middle Ages?

Knowing that today iodine comes either from fish products or (artificially) enriched table salt, how did people who lived far from the sea survive before (especially during the the Middle Ages)? Edit ...
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1answer
45 views

How to measure metabolic rates of microscopically small animals?

I want to measure metabolism rates in Tardigrades Metabolic rates will be assessed immediately following their exit from cryptobiosis (an animal dormant state). I know that oxygen levels is the ...
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30 views

Energy metabolism in Cancer cells

The TCA cycle intermediate Isocitrate dehydrogenase commonly undergoes point mutations in cancers. This allows IDH to reduce a-Ketogluterate to 2Hydoxygluterate, causing a reduction in pVHLs ability ...
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1answer
55 views

How does the body “know” how to metabolize foreign substances

As a freshman biochemistry major, I find myself befuddled by our body's ability to perform complex chemical reactions to break down foreign substances. I can see how we would evolve explicit pathways ...
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2answers
416 views

What causes muscles to generate heat on contraction?

I'm curious what the exact cause is of dramatic heat generation that comes along with muscle activity. Can anybody explain this in understandable language?
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1answer
35 views

What is the biggest facultative anaerobic metazoan known to science?

Related: What's the biggest obligate anaerobic organism discovered till now? I had always assumed that the Riftia tube worms were obligately anaerobic since they lived next to anoxic volcanic ...
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0answers
38 views

Statistical method for characterizing the relationship between body mass and metabolic rate

There is a dataset that contains body mass ($x$) and metabolic rate ($y$) from many different organisms. It is common to fit the data to the model of the form $y=ax^b$ and estimate the parameters $a$ ...
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1answer
769 views

Why is the Krebs cycle considered a part of aerobic metabolism if molecular oxygen is not involved in any of the reactions in the cycle

Why is the Krebs cycle considered a part of aerobic metabolism if molecular oxygen is not involved in any of the reactions in the cycle? I originally thought that Krebs cycle was aerobic metabolism ...
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0answers
78 views

Can cats use ketone bodies as only source of energy?

I recall reading that much of the energy a cat produces from its food comes from proteins which I assume would produce energy via being catabolised into amino acids which in turn, if glucogenic, would ...
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1answer
268 views

Does THC excretion increase if urine volume increases?

In regards to the body metabolizing and excreting THC: if urination is increased as a result of drinking lots of fluids, does that mean that more THC is leaving the body? To rephrase the question, is ...
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2answers
102 views

Plotting metabolic networks?

I need to draw a map of the core metabolism of E.coli. Associated with each reaction in the map I have a number that indicates the flux through this reaction. I want the map to reflect these fluxes ...
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2answers
50 views

How does the cell regulate different metabolic pathways?

I heard somewhere that cells use different nucleosides bound to triphosphates e.g. ATP, GTP, CTP and other modified compounds: NADH, NADPH to distinguish between different metabolic pathways and so ...
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Is there any use of CO₂ in human body?

We all know CO₂ as a waste product of metabolism . Does CO₂ have any helpful role , apart from having a role in pH of blood ?
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1answer
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Need for two oxygen sensors in E. coli

E. coli has two oxygen sensors: FNR (fumarate-nitrate reductase) and ArcBA (Anoxic Redox Control, two component control systems). FNR directly senses the oxygen, while the interaction of ArcB with ...
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57 views

Tracking of oxygen molecules in glucose oxidation

For this reaction, found in typical biochemistry textbook: $C_6H_{12}O_6 + 6O_2 \to 6CO_2 + 6H_2O$ I am interested in where do the oxygen atoms of $6O_2$ go. I think they go to $6H_2O$, but this is ...
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1answer
88 views

In which way would the yeast cell cope with the excess amount of methionine in the growth media?

I guess that when there is surplus of methionine in the cell it is incorporated in the TCA cycle as a succinyl CoA, with cysteine as a by-product. But now the cell has the surplus of cysteine. What ...
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3answers
39k views

What is a coupled reaction and why do cells couple reactions?

I was wondering what exactly a coupled reaction is and why cells couple them. I read the wikipedia article as well as several others, such as life.illinois.edu but I still don't get it. Could ...
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12 views

How reactive are reduced antioxidant molecules?

When antioxidant molecules stabilize free radicals, they themselves become unstable and reactive but to a lesser degree. How reactive are these reduced antioxidant molecules? And what substance ...
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1answer
55 views

Burning fat transferred from one part of the body to another

While doing some research on cosmetic surgery, I discovered that there are several ways of doing breast enhancements, one of which was using body fat. While I haven't researched this method, I assume ...
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1answer
38 views

Can chitosan affect the absorption of unsaturated fatty acid?

I know chitosan will decrease the absorption of fat. However unsaturated fatty acid, such as DHA, is beneficial. Does chitosan effect the absorption of unsaturated fatty acid?
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3answers
301 views

What is the mechanism of oxygen uptake in E. coli?

How does E. coli uptake oxygen? Most of the literature I found is concerned with response to oxygen level supplied in the medium, as opposed to how much is actually transported inside. Can they shut ...
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2answers
410 views

In humans what is the last metabolic process to cease after death?

After death which of our body's metabolic processes will continue functioning for the longest?
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153 views

Breakdown of energy expenditure at the level of a single cell

The metabolic rate measures how much energy an organism expends over a unit of time. Its breakdown for the human body in terms of its functions is well documented : so much for the heart, for the ...
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2answers
372 views

How do antioxidants affect human metabolism?

I'd like to know how antioxidants affect human metabolism and which ones are essential for metabolic processes.
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0answers
21 views

Is body energy production and consumption cyclical?

If we look into how energy is produced by the humans, it always involves some kind of periodicity: fuel combustion rotates engines, water rotates turbines, nuclear chain reactions heat up water, which ...
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1answer
39 views

How does the human body use energy?

As far as I know the glucose gets processed from carbs and fats and as a result carbon dioxide, water and "energy" are released. The carbon dioxide and water are expelled by the body, and then energy ...
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2answers
645 views

What is an irreversible reaction?

There are reactions with large Delta G negative values. Why these reactions are irreversible? As in: out of 10 steps of Glycolysis, 3 are irreversible steps. I need an explanation for why they are ...
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1answer
106 views

How efficient is the human body at metabolizing food?

My friend and I were having a discussion over how "efficient" human digestion is. If a human ate a 1000 calorie hamburger, how many of those calories (how much energy) does the body process into ...
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1answer
52 views

Oxidation means inflamation?

All right, I was reading article on nutrition, that focussed on content analysis of pastry-like food product for kids. I have to say that I am not sure this article would pass the imaginary smell ...
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4answers
3k views

Why do we weigh less in the morning?

At first I thought it may be related to physics. You know, in one half of the day, the gravity changes, and the scale shows a different weight than the other. Then at night, gravity intensifies, and ...
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1answer
7k views

Why is my faeces black in color after eating Oreos

Why is my faeces black in colour the morning after I eat some Oreos? Day 1 : Eat a handful of Oreos & the next morning your stool is black. Day 3 : Eat a handful of cocoa flavored biscuits & ...
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1answer
114 views

The smell from eating asparagus

I am wondering about one thing. I have read different accounts of this (prior to reading it on Wikipedia), so I am wondering. Here are the two versions I have read: asparagus leads in a certain ...
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1answer
86 views

Consumption of NAD+ in glycolysis

Out of 10 steps in glycolysis, only one reaction- Glyceraldehyde 3-phosphate (G3P) to 1,3-bisphosphoglycerate (PGP), uses NAD+ and thereby producing NADH. Furthermore, this very step is solely ...
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3answers
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In Japan, the official average body temperature is 36.0 °C. Why so different from that of Europe?

The Japanese Wikipedia states that the average human body temperature is 36.0 °C (here,"ヒト"). The statement references the data from the Japanese government. Actually all of my Japanese friends think ...
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1answer
907 views

Why our body does not produce polyunsaturated fatty acids?

Our body does not produce two polyunsaturated fatty acids (PUFA): linoleic acid and alfa-linolenic acid. I am thinking reasons for it. Saturated fatty acids have more energy than unsaturated. ...
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1answer
50 views

naturally occuring fatty acids

The double bonds in naturally occurring fatty acids present in our body are in cis configuration while the enzymes for beta oxidation can act on trans double bond. Then what will be the significance ...
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1answer
80 views

What organism most efficiently converts a given quantity of mass into heat?

Question I am trying to answer: In the popular film The Matrix, heat given off by humans is harvested as an energy source. I wondered, if this were possible, would humans be a good organism to ...
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1answer
135 views

Why doesn't Diabetes cause death by starvation?

The main cause for diabetes is lack of insulin in the body. Insulin is the hormone that allows body cells to absorb glucose from the blood. With out insulin, the body cells can't get glucose from the ...