The set of chemical reactions that happen in the cells of living organisms to sustain life.

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bacterial cell wall degradation in humans

can human degrade the D-amino acid present in bacterial cell wall, I'm confused about it i have read somewhere that human can do so.If yes than why we need antibiotic to kill bacteria???If it is not ...
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2answers
79 views

Where can I find a list of common enzyme cofactors and/or co-enzymes?

Where can I find a list of enzyme cofactors and/or co-enzymes, ordered by how common they are? For example, $O_2$, $H_2O$, $ATP$, $ADP$, $NAD$, should be ranked in the first places, because they ...
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1answer
153 views

what is the margarine metabolism in our body?

margarine is commonly used food ingredients that contribute to both inflammation and obesity , but actually I want to know the margarine metabolism in the human body I can find some resources talk ...
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22 views

desaturation in fatty acids [duplicate]

humans are unable to synthesize EFA what is the reason behind it that humans cannot introduce double bond between C-10 and the methyl terminal?
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1answer
140 views

How should I feed and keep an ant queen?

I have captured wandering ant queen. I guess she was just fertilised and was looking for a place to start a hive. I'd like to create my own ant hive in artificial environment. I unfortunately only ...
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0answers
63 views

Why Mammals are unable to produce Essential Fatty Acids?

While we have to get them from our diet and if they aren't taken in our diet we will face disease.Then why we don't have the enzymes which are require for EFA synthesis???
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1answer
38 views

Currency metabolites vs. current metabolites: What's the right term?

I have seen the two terms currency metabolite and current metabolite used interchangeably. Is there a consensus on which is the ...
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1answer
88 views

Do mitochondria use ATP in order make another ATP from glucose?

Do mitochondria use ATP in order make another ATP from glucose, or does it use another source of energy to convert glucose to ATP?
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1answer
120 views

What are the lifetimes of cellular components on organelle or molecular level?

I was thinking that even though I know how generally the cell works, I don't really have a feeling of how volatile it is. I want to know what is the lifetime/turnover rate of different constituents of ...
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63 views

Why is duck fat less saturated than cow fat?

Why does the composition of fat in animals vary? Is there an evolutionary advantage to producing fat that is less or more saturated?
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180 views

Anaerobic respiration choice in E. coli

Under anaerobic conditions E. coli has two options to generate ATP: fermentation (substrate-level phosphorylation), and respiration (proton gradient, chemisomotic phosphorylation). Which is favored? ...
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1answer
244 views

What marine animals exhibit deep hibernation/aestivation?

Do marine animals exhibit deep hibernation/aestivation as land-based creatures do? If not, Why?
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1answer
70 views

Selective Androgen Receptor Agonist

I'm looking for an inducer that strongly activates the androgen receptor, but not the glucocorticoid receptor that is not DEA regulated. I know that SARMS (Selective Androgen Receptor Modulators) are ...
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36 views

Feedback affecting myocyte metabolism in humans

I understand that there are several reserves available to muscle that can be tapped for ATP, and that each reserve is being used to some degree at all times. Are these reaction rates purely due to ...
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50 views

Regulation of Cra protein level in E coli

Catabolite Activator/Repressor, Cra protein (formerly known as Fructure Repressor FruR) plays a significant role in central carbon metabolism of E coli. Its activity is inhibited by ...
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2answers
92 views

Why isn't phosphorus or nitrogen a limiting nutrient for animals?

Nitrogen and Phosphorus are usually the limiting nutrient for plants, especially for algae. Phosphorus is used for DNA, ATP and phospholipids, and Nitrogen is used for pretty much every protein a ...
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2answers
303 views

Can animals make their own unsaturated fatty acids?

I know that animals can't make poly-unsaturated fatty acids (PUFA) and so require them from dietary sources. For eg.Omega -3 and Omega 6 fatty acids. My questions : Can animals synthesize other ...
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1answer
63 views

Could the Warburg effect be used to starve cancer cells in situ?

What is wrong with the following chain of reasoning? Nearly all cancer cells rely on high rates of glucose uptake (upto 200 times more than normal cells). This is known as the the Warburg effect. ...
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2answers
408 views

Why isn't the phosphoglycerate kinase reaction of the glycolysis pathway irreversible?

Step 7 of the glycolysis pathway is the conversion of 1,3-bisphosphoglycerate into 3-phosphoglycerate by the action of the enzyme phosphoglycerate kinase, resulting in the production of 2 ATP ...
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1answer
74 views

What is the energy consumption of the brain?

What is the energy consumption of the brain, and is there a difference in consumption when waking and sleeping?
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1answer
101 views

How do Gram + bacteria use a proton gradient for F-type ATPase?

Does anyone know of any papers showing how Gram positive Fermiculates or Actinobacteria use a H+ gradient for an F-type ATPase, It seems impossible since there is no outer LPS membrane to maintain ...
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4answers
2k views

Do any organisms recycle their own waste internally?

I thought of this question yesterday and it turns out it's surprisingly hard to Google.
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2answers
222 views

carbohydrates and lipids as a source of energy? why?

Why carbohydrates and lipids basically used as a sources of energy? Why only proteins are used as building blocks of all the creations? Yes there are some parts of cells like cell walls in which ...
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3answers
464 views

Are all body atoms really recycled several times during a life?

I heard a point, that all (human) body atoms are recycled withing short period like few years. Recycled means "old" atoms are replaced by "new" ones during metabolism, leaving only structure ...
2
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1answer
65 views

How much solar energy required to compensate food?

Just curious, how much solar energy can power an (herbivore) animal? Specifically, is it enough sunlight on Mercury (4 to 10 times brighter than on Earth) to "feed" a zebra? Will it be sufficient at ...
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1answer
49 views

Is it easier to burn a calorie of fat or a calorie of a carbohydrate?

Say someone eats 100 calories of chocolate vs. 100 calories of carrots. Something tells me that eating the chocolate will lead to you generating more fat. Will it? Is it harder to burn the calories ...
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1answer
114 views

What constitutes the determination of a normal blood glucose level?

Several on-line resources (e.g. MedlinePlus) suggest: Normal range for non-diabetic people who are fasting should range between: 70 and 100 milligrams per deciliter (mg/dL) Non-diabetic people who ...
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2answers
79 views

Why do humans circulate monosaccharides instead of disaccharides as in plants?

Plants transport food mostly in the form of disaccharides like sucrose but humans transport them in the form of a monosaccharide - glucose. What is the reason behind this ?
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108 views

How to relate human metabolic model reactions and cancer drug targets / reactome items?

Trying to find a way to take a cancer drug (from CancerDR, for instance) and infer the metabolic reactions that are affected by it in the Human Metabolic Model. Essentially, I would like to know ...
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67 views

How usable is the Human Metabolic Model to predict biomass?

In order to use the Human Metabolic Model for Flux Balance Analysis of specific cancer cell lines, we would like to know what sort of flux values have been determined for the Human Metabolic Model. ...
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1answer
33 views

What are good data on the Human Metabolic Model and where can I get them?

Trying to get a good SBML representation of the Human Metabolic Model for use in Flux Balance Analysis and drug targetting (i.e. gene knockout) simulations. What are good sources for these data? ...
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65 views

Where can I find the metabolic network for the human erythrocyte?

Where can I find the metabolic network of the human erythrocyte (red blood cell), in SBML format? The red blood cell metabolic network is a model that's usually employed in the literature [see refs ...
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2answers
170 views

How to determine the actual flux in the human metabolic model of a cell line?

The problem to be solved is to determine what the flux values are for the different reactions in the human metabolic model. As far as I understand, a good way to do that would be to use gene ...
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1answer
61 views

Isoprenoid Diphosphate Concentration in Yeast saccharomyces cerevisiae

Isoprenoid Diphosphate(IPP) is an important metabolites which is precursor in lot of secondary metabolites like Dolichol diphosphate, ubiquinone, prenylated proteins and carotenoid (not synthesized ...
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3answers
136 views

Assay for Beta-galactosidase activity in single cell microscopy

I'd like to be able to measure the activity of $\beta$-galactosidase in living cells with simple optical (maybe fluorescence) microscopy. Ideally I'd like to do a minimum of genetic engineering, and ...
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206 views

Why does beta-2-Thienylalanine inhibit bacterial growth?

I'm trying to obtain a better understanding of the Guthrie Test, which checks whether people have a disease called PKU. The Guthrie test uses bacteria to check for Phenylalanine (the amino acid) in ...
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6k views

What are the differences between white and brown adipose tissue?

What are the differences between white and brown adipose tissue? Here are some that I have come across: ...
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2answers
4k views

Why is glucose our primary source of energy?

Is there any evolutionary reason for glucose being the "main" molecule used as a source of energy, beginning with glycolysis and subsequently cellular respiration (after being converted to two ...
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1answer
34 views

Genotoxic agent and their metabolic pathway

What are the mechanics (set of biochemical reactions) allowing a given genotoxic agent to modify the mutation rate at a given spot? to induce only a given type of mutation (from Gs to Cs for ...
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1answer
105 views

How can we distinguish blended flavors?

As far as I know, humans can distinguish between 5 basic tastes based on various molecules in food and their interactions. There's a level to all 5 so there can be an endless variety of tastes, and we ...
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1answer
76 views

Aerobe or facultative anaerobe organism that metabolizes acetate?

I'm assuming bacteria, but will take any suggestions. Organism must survive primarily on the acetate (plus trace elements), but I can give/take electrons, if necessary. Not interested in strict ...
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60 views

Why is a nicotinamide-tryptophan combination used to treat affective episodes in a few older clinical trials?

At least one of the journal articles that reported on such clinical trials allured to the nicotinamide-tryptophan pathway that I assume must be related to the metabolism of tryptophan into serotonin ...
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82 views

Are simple esters like those used as flavouring agents metabolised into their constituent carboxylic acids and alcohols in the human body?

By this I mean to ask whether say ethyl butanoate is hydrolysed in humans into ethanol and butyric (butanoic) acid. This is of interest to me as a pharmacology researcher because butyric acid, for ...
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28 views

Are there any enzymes synthesised by humans that specifically catalyse the hydrolysis of non-cyclic Imides?

Imides or dicarbonyl amides are an interesting class of compounds that includes the pharmaceuticals thalidomide, aniracetam and a few other drugs. These compounds, however, are cyclic and I'm ...
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1answer
86 views

Hibernation, Metabolism and Aging

People are beginning to seriously research space travel applications of therapeutic hypothermia, specifically for reducing metabolism and stress on humans traveling to Mars. It seems that as you ...
6
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90 views

What mechanisms tell temperate trees when to drop leaves?

I've been looking around and cannot find a definite answer on what it is that tells trees to change their metabolism and drop leaves. I see that such activity is called Deciduous. What interests me ...
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1answer
436 views

How can haired mammals synthesize vitamin D?

The human body can synthesize vitamin D in the skin from cholesterol, when sun exposure is adequate. But how can haired mammals do it? Do not they need it?
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64 views

Iron metabolism in the brain

I did an expression profiling from publicly available RNAseq data for mouse tissues. While for liver and testes I am getting expected proteins in the top highly expressed mRNAs, for brain I am getting ...
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1answer
368 views

How Does Green Tea Increase Metabolism?

According to the article "Green Tea Supplementation Affects Body Weight, Lipids, and Lipid Peroxidation in Obese Subjects with Metabolic Syndrome", Green tea increases metabolism and fat loss: ...
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75 views

Food Intake versus ability to flee among birds, particularly the hummingbird?

Logically speaking, if a hummingbird drinks too much nectar, it will be temporarily overweight and less able or unable to fly to escape danger. However if the same hummingbird doesn't drink enough ...