The set of chemical reactions that happen in the cells of living organisms to sustain life.

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Aerobe or facultative anaerobe organism that metabolizes acetate?

I'm assuming bacteria, but will take any suggestions. Organism must survive primarily on the acetate (plus trace elements), but I can give/take electrons, if necessary. Not interested in strict ...
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58 views

How is Energy Generated in Cats?

I recall reading that much of the energy a cat produces from its food comes from proteins which I assume would produce energy via being catabolised into amino acids which in turn, if glucogenic, would ...
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49 views

Why is a nicotinamide-tryptophan combination used to treat affective episodes in a few older clinical trials?

At least one of the journal articles that reported on such clinical trials allured to the nicotinamide-tryptophan pathway that I assume must be related to the metabolism of tryptophan into serotonin ...
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42 views

Where can I find complete description of the nucleotide biosynthesis?

I'm looking for a good source for learning nucleotide biosynthesis pathway (including enzymes and possibly also structural formulas) - what is the best source I could find such pathway, presented in a ...
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62 views

Are simple esters like those used as flavouring agents metabolised into their constituent carboxylic acids and alcohols in the human body?

By this I mean to ask whether say ethyl butanoate is hydrolysed in humans into ethanol and butyric (butanoic) acid. This is of interest to me as a pharmacology researcher because butyric acid, for ...
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26 views

Are there any enzymes synthesised by humans that specifically catalyse the hydrolysis of non-cyclic Imides?

Imides or dicarbonyl amides are an interesting class of compounds that includes the pharmaceuticals thalidomide, aniracetam and a few other drugs. These compounds, however, are cyclic and I'm ...
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68 views

Hibernation, Metabolism and Aging

People are beginning to seriously research space travel applications of therapeutic hypothermia, specifically for reducing metabolism and stress on humans traveling to Mars. It seems that as you ...
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70 views

What mechanisms tell temperate trees when to drop leaves?

I've been looking around and cannot find a definite answer on what it is that tells trees to change their metabolism and drop leaves. I see that such activity is called Deciduous. What interests me ...
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179 views

Why are there so many medicinal plants?

Here is wikipedia page containing a list of plants used in herbal medicine. One might first want to argue that many of them actually do not have any medicinal/beneficial effect on heatlth. I think we ...
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233 views

How can haired mammals synthesize vitamin D?

The human body can synthesize vitamin D in the skin from cholesterol, when sun exposure is adequate. But how can haired mammals do it? Do not they need it?
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55 views

Iron metabolism in the brain

I did an expression profiling from publicly available RNAseq data for mouse tissues. While for liver and testes I am getting expected proteins in the top highly expressed mRNAs, for brain I am getting ...
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354 views

How Does Green Tea Increase Metabolism?

According to the article "Green Tea Supplementation Affects Body Weight, Lipids, and Lipid Peroxidation in Obese Subjects with Metabolic Syndrome", Green tea increases metabolism and fat loss: ...
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71 views

Food Intake versus ability to flee among birds, particularly the hummingbird?

Logically speaking, if a hummingbird drinks too much nectar, it will be temporarily overweight and less able or unable to fly to escape danger. However if the same hummingbird doesn't drink enough ...
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152 views

What effect do oligosaccharides, like those found in legumes, have on the composition of intestinal flora in humans and if so how so?

I know that intestinal flora metabolising oligosaccharides, like those found in legumes, is the cause for the well known fact that legumes cause flatulence, but does an oligosaccharide-rich intestine ...
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175 views

How is transport of glucose into prokaryotic cells different from transport into eukaryotic cells?

I was reading page 92 of Fundamentals of Microbiology, 4th edition, which states In facilitated diffusion, the substance (glucose, for example) to be transported combines with a plasma membrane ...
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84 views

How do cells slowly degrade 5,5'-dibromo-4,4'-dichloro-indigo?

5,5'-dibromo-4,4'-dichloro-indigo is the product of X-gal cleavage, often used as a reporter with B-galactosidase. I've made the (unreferenced) observation that it seems as though the blue product ...
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77 views

Which Enzymes Catalyse the Deacetylation of Drugs in the Human Body?

If you would like more specifics seeing how I realise that this question is very broad and may be difficult to answer in general then hopefully the following will help you out: I am particularly ...
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194 views

During famine, does the human body do anything to prioritize which organs receive nutrients?

When food is scarce, the body slows its metabolism. Are there any other systems or processes that encourage prioritization of organs?
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222 views

How Antioxidants affects Human Metabolism?

I'd like to know how antioxidants affects the human metabolism and which ones are essential for metabolism processes.
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296 views

In humans what is the last metabolic process to cease after death?

After death which of our body's metabolic processes will continue functioning for the longest?
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208 views

Why does the hydrolysis of ATP increasing entropy increase the Phosphoryl-­‐transfer Potential?

I am currently taking a biology class. I do not understand this concept. I understand that the electrostatic repulsion of the negative charges, resonance stabilization and hydration stabilization all ...
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59 views

Are (baseline) high blood levels of melatonin associated with either circadian rhythm or mood disorders?

(Exogenous) melatonin is administered at night for treatment of circadian rhythm disorders, but melatonin taken during the day is linked with depression. I would like to know if high blood levels of ...
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114 views

E. coli values for [enzymes], [metabolites] and kinetic rates

In my attempt to create a metabolic model of E. coli, I have found a comprehensive list of metabolic reactions and their stoichiometry. The one I am currently using is E. coli model iJO1366 (more ...
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351 views

What is the biological mechanism underlying caffeine intolerance? (CYP1A2 or other?)

As far as I can tell, caffeine metabolism occurs primarily via the CYP1A2 enzyme. I am curious as to whether mutations in the CYP1A2 gene are associated with caffeine intolerance. Some site that is ...
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77 views

How might one determine if bacteria are nitrogen fixing or not?

If you had an isolate bacteria sample how would you determine if they were nitrogen fixing?
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103 views

Where does all the food go?

Food goes in, excrements come out. This seems obvious. But it seems like the mass of the excrements is less than the one of the food. Most people I asked answered: "There's a difference because it's ...
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70 views

Is anaerobic activity during ketosis possible?

When a person's glucose and glycogen stores are depleted, which can occur due to fasting or due to a diet consisting largely of fat (like eskimo diets), the body produces its energy by breaking down ...
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101 views

Cooking with sawdust

In a book about post-war Japan (Embracing Defeat, Dower) the author mentions a process for making sawdust at least partially edible, so it could be used in recipes in a 1:4 ratio with flour for ...
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98 views

Where does an organism store reserves of amino acids?

Where does an organism store reserves of the amino acids it needs to build various proteins it needs -- in the liver ? in the blood ? in every cell ? Thanks
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293 views

Do effects of caffeine on human body change with habitual use?

I've been reading about homeostatic nature of a lot of neurobiological processes - the brain is trying to maintain a balance by desensitizing receptors, re-uptaking and breaking down ...
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429 views

Does the brain and the body use the same energy source (glucose/ATP)?

I've heard that the brain consumes quite a lot of oxygen and energy, compared to the rest of the body. What I'm interested in is if this is the kind of energy and oxygen that the rest of the body ...
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60 views

Is there such thing as “meters per calorie” for living organisms?

I'm interested in learning if there's some way of quantifying the organism's metabolic efficiency associated with movement. It seems to me that some organisms would be more efficient than others at ...
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195 views

What preceded ATP synthase?

ATP Synthase is ubiquitous throughout life on earth and so most probably evolved within the last universal common ancestor (LUCA) before that lineage diversified into the various kingdoms of life. ...
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299 views

How was the diversity between ethanol fermentation and lactic acid fermentation evolved?

Quite simply, some organisms metabolize glucose under anaerobic conditions via Glucose->(2) Pyruvic Acid->(2)Ethyl Alcohol. Some organisms, however, metabolize to lactic acid. When did such a process ...
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214 views

What is the molecular basis of hangovers?

Well, most of us have experienced the wonderful feeling of the dreaded hangover. How does it work exactly? I imagine it has something to do with dehydration but what are the underlying mechanisms? ...
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207 views

What are the biochemical processes occurring when food spoils?

Let's assume for a minute that microbes themselves and their direct toxic products (i.e. endotoxins) aren't toxic to humans. Let's also discount any innate immune responses the body mounts against the ...
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2k views

Is there an evolutionary reason for the 5 electron transport complexes in plants and animals?

The electron transport chains of both the light reactions of photosynthesis (in plants) and oxidative phosphorylation (in animals) both contain 5 complexes including ATP synthase, as shown below. ...
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4k views

Does mixing alcoholic drinks really make you more drunk?

There is plenty of anecdotal evidence ("beer after wine and you'll feel fine, wine after beer will make you feel queer") that mixing alcoholic drink types leads to a stronger effect, but I can't find ...
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80 views

In which way would the yeast cell cope with the excess amount of methionine in the growth media?

I guess that when there is surplus of methionine in the cell it is incorporated in the TCA cycle as a succinyl CoA, with cysteine as a by-product. But now the cell has the surplus of cysteine. What ...
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244 views

Are there any intersections between the biochemical pathways of uracil biosynthesis (or metabolism) and methionine degradation in eukaryotes?

Is there any way in which uracil biosynthesis or metabolism could help cell in degradation of toxic levels of methionine?
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Why can't the brain and red blood cells use fuels other than glucose?

The question is rather straight forward: I have always been curious as to why, but cannot find an explanation online. I can imagine that the mechanism is different for each, but why does brain tissue ...
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Predicting and identifying microbes and enzymes DNA sequence with metabolic prediction

Presently I am working on metagenomics of coal biomethenation by bacterial consortium. I have got the sequence result (Illumina). The sequence is huge and I can't predict anything from the sequence. ...
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What happens to dextrorotatory amino acids in humans?

As indicated by this question, most of the amino acids in the human body have the L-chirality. As enzymes also have handedness, what happens to the D-amino acids that end up within the human body? Are ...
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1k views

What does vitamin B6 and B12 absorption depend upon?

I'm looking at my question about homocysteine metabolism and am doing a followup inquiry into vitamins B6(Pyroxidine) and B12(Cyanocobalamin). I've found this interesting bit about vitamin B12 and am ...
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56 views

What is the role of Homocysteine in cognitive function?

I'm looking at this link : Homocysteine and cognitive impairments and am looking for more information on specific cognitive impairments associated with elevated levels Homocysteine. That article is ...
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24k views

What is a coupled reaction and why do cells couple reactions?

I was wondering what exactly a coupled reaction is and why cells couple them. I read the wikipedia article as well as several others, such as life.illinois.edu but I still don't get it. Could ...
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1answer
224 views

Why does muscle tissue have relatively constant AMP + ADP + AMP?

I was going over slides of energy expenditure in muscle cells. It mentions that in muscle tissue, the cell's energy charge ([ATP] / [AMP]) is the principle factor controlling glycolytic activity, and ...
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535 views

When is the lactase in lactose-free milk active?

Recently we have started suspecting that one of our children has hypolactasia (lactose intolerance), and so accordingly I have had my first exposure to lactose-free dairy- and dairy-like products. In ...
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431 views

Circulation through the liver in light of drug metabolism

I have a lingering question which stems from an answer that I gave to What hydrolyses aspirin within the digestive tract and blood stream? When a drug or any other substance is absorbed into the ...
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147 views

Negative feedback in the fructose metabolism in liver

What happens in liver when large amount of fructose is consumed? I vaguely remember my biochemistry lecturer telling us that the enzymes that process fructose in the liver does not have negative ...