Microbiology is the study of organisms that are too small to be seen with the naked eye. This includes organisms like bacteria, fungi, protozoa, and others.

learn more… | top users | synonyms

0
votes
0answers
41 views

Are there any viruses that are part of all land animals?

An article on I Fucking Love Science (linked to below) got me thinking, are there any viruses that have been so successful that they have spread to all land animals similar to Toxoplasmosis which has ...
4
votes
1answer
95 views

Is there any way the food industry can benefit from biofilms?

I realize all of the disadvantages, but I am wondering if the food industry can actually benefit from the formation of biofilms.
1
vote
1answer
138 views

Molecular Cloning- Blunt end restriction endonucleases

I work in a microbiology lab where we do a lot of cloning. I have always used restriction endonucleases to cleave the DNA to have sticky ends and not blunt ends. I currently am working on a project ...
7
votes
1answer
184 views

How many eukaryotes are there on Earth?

I have been reading: William B. Whitman, David C. Coleman, and William J. Wiebe, "Prokaryotes: The unseen majority", Proc. Natl. Acad. Sci. USA 95, pp. 6578–6583, June 1998. [Full Text] [PDF] ...
1
vote
3answers
46 views

What are some places where biofilms could develop? [closed]

I'm trying to think of places where a biofilm could develop other than on medical equipment or food processing equipment such as stainless steel mechanized blades or knives. I'm thinking more along ...
1
vote
0answers
19 views

What are the main principles of the Bacteriological Code?

Although the Bacteriological Code is an important guideline for taxonomists and microbiologists, describing the criteria for delineating species and higher taxa of the prokaryotes, I, and plenty of ...
4
votes
1answer
85 views

How can fresh cavities form at the margins of sliver amalgam fillings on teeth?

Silver amalgam fillings predominantly contain silver a known bactericidal agent and mercury which a known toxin and has bactericidal property. So how is it that the plaque bacteria survive near the ...
1
vote
1answer
83 views

Optimization of E. coli growth in D₂O (heavy water)

I would like to find a method of increasing the biomass of my D2O cultures because my current method is not yielding enough protein. I would like to also minimize the amount of H2O in my culture. My ...
0
votes
0answers
37 views

What's the composition of Actinobacteria's hyphae?

I'd like to know which chemical compounds form hyphae in Actinobacteria. Is it the same structure of the cell wall? Thank you
3
votes
2answers
206 views

DNA polymerase I exonuclease activity

Does DNA polymerase I in bacteria use forward or reverse exonuclease activity to remove RNA primers? One of my books says it uses 5' to 3', but another says it uses 3' to 5' exonuclease activity. ...
4
votes
1answer
141 views

Identify the pink mold infecting refrigerated lemons [closed]

I made lemon juice 6 month ago. I just washed the lemon using brush and then cut them into pieces. Then I put one layer of lemon in the bottle followed by one layer of sugar Again one layer of lemon ...
4
votes
2answers
2k views

Do all Gram negative bacteria cause septic shock?

Do all Gram negative bacteria cause septic shock? If they don't could they if you attacked them with an antibiotic that could lyse the cell? For example any antibiotic that attacks the cell wall, ...
2
votes
0answers
230 views

Pink E.coli cell pellet. Reasons? [closed]

I've harvested IPTG induced E.coli BL21DE3 cells' suspension culture by spinning at 5000 rpm/15 min/4 degrees C. The pellet after spin looked pale pink colored. What could be the reasons?
2
votes
1answer
47 views

What is the common diet of food-related IBS patients? Besides most patients being lactose intolerant, what other intolerances do they face?

I am currently writing a paper on irritable bowel syndrome, and I was wondering what the common diet of a patient with food-related IBS consists of. I've already begun discussing the pathogenesis of ...
5
votes
1answer
186 views

Fermentation to acetic acid

How much time is needed for the fermentation to acetic acid production cycle, and the conversion of apple vinegar in a sealed container incubated at 37 °C? Should be in the fully closed? What is ...
1
vote
0answers
84 views

Effect of flask position in shaking incubator affects growth kinetics

During some cultivation experiments for my bachelor thesis I noticed that in liquid culture my bacteria (E. coli) grew differently, according to the position in the shaking incubator. Because the ...
0
votes
2answers
1k views

Does “Garbage Enzyme cleaner” contain cleaning enzymes?

There are many recipes which call for using fruit peel fermentation process to make a concentrated enzyme cleaner solution, some variations call to add bakers yeast. So the question arises that does ...
1
vote
2answers
587 views

Why would yeast grow but not produce alcohol?

I'm studying for my intro to microbiology test and I have a question asking why a culture of yeast responsible for producing alcohol would be growing, but not producing alcohol? The multiple choice ...
7
votes
1answer
99 views

How exactly can dsRNA be introduced to a cell?

Is it just by viruses or are there other means by which it gets into cells, such as plasmid uptake?
5
votes
1answer
105 views

Are all functions of a human cell known? [closed]

Please bear with me as I'm intruding into your world from a computer science background. In programming, once you have created a program, you know all functions of that program. Thus, 100% knowledge ...
1
vote
0answers
44 views

Alkaline Phosphatase

What is the predominant purpose of Alkaline Phosphatase in skeletal muscle fibers and liver cells. I know that it is a hydrolase enzyme that speeds up the degredation of proteins, lipids, starch and ...
4
votes
1answer
81 views

Why is the ebola virus so intense now?

So i'm looking into the ebola crisis and it seems the death toll is really getting crazy. I understand that it's a cytomegalovirus and that it basically overwhelms the immune system due to it's size ...
0
votes
1answer
39 views

Does adding antibiotic after 5-10 mins of innoculation affect the protein yield or growth?

I've asked a lab colleague the same question. She said, it would loosen the bacterial cells in the LB medium and plasmids would come out. Is that true? and why?
2
votes
0answers
37 views

What do we know about the cellular structure, processes, environment, and immediate ancestors of the last universal common ancestor (LUCA)? [closed]

I am up for all scientifically sound speculations, and sources are highly welcome. I've looked into this quite a bit myself via scholar.google, the wiki article, and /r/askscience. I'm really looking ...
4
votes
3answers
1k views

What is the mechanism of oxygen uptake in E. coli?

How does E. coli uptake oxygen? Most of the literature I found is concerned with response to oxygen level supplied in the medium, as opposed to how much is actually transported inside. Can they shut ...
2
votes
2answers
434 views

What type of photosynthesis is performed by phytoplankton?

I am not a biologist, but I know there exist three variants of photosynthesis, namely C3, C4 and CAM. I would like to know what type is used by the ocean's phytoplankton? It might also be that ...
4
votes
3answers
5k views

Why do yeast ferment Equal sweetener

I had my students conduct a fermentation experiment manipulating sugar amounts (number of sugar packets in solution) and measuring CO₂ production via capture in a balloon and measuring circumference ...
0
votes
1answer
348 views

Answer the questions in one word with help of clues and images given [closed]

Name the things associated with Antonie Van Leeuwenhoek - (6 pictures are given for help and four of them are associated with these clues) a)Leeuwenhoek was the first to describe these and hence ...
4
votes
1answer
436 views

What do you call a virus when it's cured?

When a cure has been found for a virus, can it be called such anymore? Virus implies it's something you've contracted that you just have to live with until (hopefully) your body can overwhelm and ...
8
votes
3answers
1k views

What is this microscopic image from Peter Gabriel's New Blood album cover?

This image appears on the cover of Peter Gabriel's album New Blood. It appears to be a photograph of some microscopic biological cell. But it doesn't look like a blood cell to me. What kind of ...
0
votes
2answers
128 views

Rhizosphere vs. Endorhiza?

In microbiology and the naming of the various areas of the plant as it relates to microbial inhabitance, I am confused as to the difference between the terms endorhiza and rhizosphere. In this case I ...
3
votes
1answer
83 views

Did the Britons 100 years ago have different intestinal flora and fauna?

Note: this is not a question about history, but about human digestive system over time :) I know a lot of colleagues who traveled for business trips to India. All of them caught terrible diarrhea ...
6
votes
2answers
3k views

Why do different bacteria have different shapes?

Why do different bacteria have different shapes? Is it only related to their function?
2
votes
1answer
1k views

Can Naegleria fowleri enter through your ear?

Is it possible to get infected with the amoeba, Naegleria fowleri, through your ears, or is the nose the only way it can enter to cause infection? How commonly is it found in your stool as well?
2
votes
2answers
137 views

What does it mean to perform in vitro experiments with mutant bacteria?

I came across the following sentence while reading the paper: Nanchen, Annik, et al. "Cyclic AMP-dependent catabolite repression is the dominant control mechanism of metabolic fluxes under glucose ...
2
votes
3answers
181 views

Why HIV patients have greater virulence of M.tuberculosis?

I am reading Murray Microbiology book. Some facts M. tuberculosis is an intracellular pathogen. At the time of exposure, M. tuberculosis enters the respiratory airways and infectious particles ...
1
vote
1answer
192 views

What is the expected effect of pH on the activity of a fungal pectinase?

I am working on an enzyme assay for a fungal pectinase.I assayed the enzyme in different buffers from pH 1-12.5 However,the enzyme has good activities starting from pH1-10.5. Is it possible to have ...
4
votes
1answer
939 views

DpnI over-digestion

We have a long protocol that we are optimizing that includes DpnI digestion of a PCR product (to remove any of the template DNA if it's methylated, and while we're not certain in the blind tests, ...
3
votes
1answer
59 views

Can a plate with incompletely filled LB agar be used?

I am falling short of LB agar plates and I have a plate with less LB agar poured. I meant, the plate is not fully filled with the agar (it was the last plate I poured the medium into). Some part of ...
2
votes
1answer
87 views

Prokaryotic Ribosomes

During bacterial protein synthesis, when ribosomes attach to the cytoplasmic membrane and form a polysome, to what molecule are the ribosomes attaching? Is the polysome held to the cytoplasmic ...
6
votes
1answer
130 views

Organisms in food deposits

I have just discovered that my kitchen sink pipe has been leaking for quite some time (possibly months) which has resulted in water and food deposits collecting in my cupboard. I smeared some of the ...
3
votes
1answer
284 views

Consumption of NAD+ in glycolysis

Out of 10 steps in glycolysis, only one reaction- Glyceraldehyde 3-phosphate (G3P) to 1,3-bisphosphoglycerate (PGP), uses NAD+ and thereby producing NADH. Furthermore, this very step is solely ...
5
votes
1answer
8k views

Calculation of the bacterial growth rate from a spectrophotomer growth curve

Typically the microbial growth in liquid cultures is monitored by turbidity. Data is obtained with a spectrophotometer to measure optical density at 600nm. The slope of the bacterial kinetic curve in ...
2
votes
1answer
46 views

What is a good review book/source for microbiological diagnosis?

I am trying to find the diagnosis figure for different bacteria where phases are illustrated. I am using at the moment: 1) First Aid for the USMLE Step 1 2013 and 2) Medical Microbiology by Murray et ...
4
votes
1answer
85 views

Can we attack viruses by attaching proteins and such to their shells?

Haven't looked into this to very long, but an initial search didn't return anything. HIV uses certain co-receptors to enter our cells. Could we flood the blood stream with specially designed ...
2
votes
3answers
96 views

Use of salt as preservative

I know that salt is used as preservative as it dehydrates microbes. Is there any other advantage like - altering pH or inactivating microbial enzymes ?
1
vote
1answer
39 views

What is the specific use of a capsule in E.coli?

In evolutionary terms, will the capsule cease to exist someday or will it improve ? Does it provide any boost to the organism in any way which harms us ? Can't we remove capsules or engineer E.coli ...
5
votes
1answer
109 views

Scale up of Bacterial growth from 250mL to 1-5L?

I am currently growing up a specific strain of E.Coli with a knockout in 40mL of growth medium (LB) in a 250mL shaker flask... My ultimate goal is to scale up this process to a 1-5L large scale setup ...
5
votes
2answers
760 views

What happens to lactic acid I eat?

Let's say I drink some Kefir Milk, what happens to the lactic acid in the Kefir Milk that has entered my digestive system?
2
votes
1answer
109 views

How HIV Affects and Its Treatment using Combination Therapy

Can someone please help me with the following questions. I've written my specific questions right after the text question. Human immunodeficiency virus (HIV) is a retrovirus. Its genome is a single ...