Questions pertaining to populations of organisms.

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1answer
36 views

What type of Interspecific relationship does this graph depict?

The other day in class, our AP Biology teacher presented us with the following graph and asked us to determine which of the following interspecific relationships it represents: (A) ...
3
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0answers
27 views

Effect of sex-ratio on the effective population size

As stated on this wikipedia article, the effective population size $N_e$ when the sex ratio differs from $\frac{1}{2}$ is $$N_e = \frac{4N_mN_f}{N_m+N_f}$$ I understand the biased sex-ratio ...
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0answers
60 views

How many fish are there? [closed]

I am trying to research the estimated population of certain fish throughout time. The fish I cannot seem to find out what I want to know are: Tilapia; Trout; Salmon; Tuna; and Anchovies. Sources that ...
2
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1answer
33 views

Parametric Bootstrap Capture Recapture

I am using the (one sample) capture recapture for estimating hidden human population. One sample method uses purely frequencies of capture to estimate population. One of my colleague suggested ...
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0answers
56 views

Population growth curve for rabbit without predation [closed]

What should a growth curve look like when a rabbit population is introduced on an uninhabited island without predation or disease or natural calamity and plenty of food? The answer seems to be given ...
1
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1answer
37 views

What do “reduced antipredator defense” and “reduced antipredator vigilance” mean?

I encountered the terms "reduced antipredator defense" and "reduced antipredator vigilance" in this book Can you help me to make sense of these terms?
0
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1answer
32 views

How to determine the relationship of competition or cooperation?

I am currently studying the interaction of Twitter memes (two or many), such as competition and cooperation. Is there any model or method in biology that can identify the types of the relationship, ...
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2answers
194 views

Examples of prey predator interactions where density of predator is very low and prey form groups when the predator attacks the prey for food

Examples of prey predator interactions where density of predator is very low (has a threat of extinction) and prey form groups when the predator attacks the prey for food. I have searched this ...
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2answers
538 views

Is global life expectancy normally distributed?

I am trying to find out what the world distribution of life expectancy looks like.
0
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1answer
15 views

Where can I find a global life expectancy table?

I've found good information on specific countries and demographics, but I can't seem to find global numbers. I know that the world life expectancy is around 71.0, but I'm trying to get a percentile ...
2
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1answer
191 views

What is the global average BMI?

I have been looking for hours trying to find this number, and can't seem to get a straight answer. I've seen some studies that calculate the change in BMI, but for some reason they don't give you the ...
4
votes
2answers
72 views

Is it possible for two people to repopulate earth? [closed]

Today I was wondering this question whether it is possible for two people to repopulate Earth. What if everyone else disappeared, except for two people (man & woman)? Can they repopulate? In ...
2
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1answer
44 views

Who was the first to coin the terms of soft and hard selection?

Soft and hard selection are sometimes used with different definitions. I have been told that at first place hard and soft selection has been defined in the following way: soft selection: Each deme ...
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0answers
44 views

Variance in reproductive success and effective population size

Background The effective population size $Ne$ is the size of the Wright-Fisher population that experience the same amount of drift than the population under consideration. The higher the variance in ...
3
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1answer
39 views

What is the distribution of the number of heterozygotes in finite populations?

Consider a bi-allelic locus with alleles A and a. We denote the frequency of the A allele by ...
2
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1answer
47 views

How do we call a region of low carrying capacity?

I am looking for a convenient word to define a region of the landscape where the local carrying capacity (population size) for a given species is low but different from zero. The species is still ...
3
votes
1answer
67 views

How could one calculate the gene flow between two populations?

Imagine there are two populations X and Y, and for each population you have the genotypes of each individual in that population (e.g. Aa, AA, aa, etc.), but for multiple loci (e.g. AABb). How could ...
3
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1answer
63 views

History: Do evolutionary and ecological processes occur at the same timescales?

Classically, it was thought that evolutionary processes occurred at a much slower pace than demographic/ecological processes. Nobody, ever thought about incorporating both processes into the same ...
5
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0answers
55 views

Variance in Fst in the infinite island model

The most famous result in the study of structured populations come from Sewall Wright. He showed that in an island model, where each subpopulation is of size $N$ and the migration rate is $m$, then ...
6
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2answers
124 views

Within and Between Allelic Class Diversity

I am reading Charlesworth et al. 1997. They talk about diversity within and between allelic classes. Nucleotide diversities ($π$) at each neutral site were estimated from the mean of $2 \sum z_t ...
2
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1answer
135 views

Why does the number of mutations per individuals follow a Poisson distribution?

I was reading this review. On page 11, left column, first paragraph, one can read: [..] there is a Poisson distribution of the equilibrium number of mutations per individual, if fitness effects ...
4
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0answers
65 views

Understanding F-statistics in population genetics

I am reading a classical Weir and Cockerham 1984 paper about Fst estimation. At the beginning (first page, right column), they define 3 statistics. $F$ is the correlation of genes within individuals ...
3
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0answers
38 views

Expected reproduction rate of a dandelion and/or fern

I am working a basic mathematical/computer simulation of an ecosystem, and I need to know the birth rate of each organism in my simulation. However, I could not find any data for how often a small, ...
7
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1answer
2k views

How should species density be calculated for a clumped distribution?

Lets imagine 5 plots of different size are sampled for a target species: ...
18
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2answers
286 views

Was the recent “conservation hunt” of a black rhino supported by science?

CNN recently covered a sanctioned black rhino hunt in Namibia by Texan Corey Knowlton, who bid US$350,000 for the license. In the story, he claims that the hunt was actually supporting conservation of ...
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0answers
29 views

Analytical Methods for Estimating Probability of Fixation

The probability of fixation $P$ of an allele is an very important measure and there exists several solutions to estimate this probability. Each method has its own assumptions and it is often hard to ...
7
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1answer
83 views

Basic Modelling in Quantitative Genetics

I am pretty bad in thinking quantitative genetics models. I am trying to get some basic understanding of modelling the evolution of a quantitative trait. I am therefore asking for help to analyze a ...
1
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1answer
55 views

Human population growth - where can I find the data?

Out of curiosity, I'd like play around with data of human global demography. Where can I find data that describe the "per region (per continent for example) population size" versus time since the ...
2
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1answer
114 views

Recessive alleles at Hardy-Weinberg equilibrium

I've run into a question that I disagree with others on but I would like to receive the input of others. The question is: If a population is at Hardy-Weinberg equilibrium, which of the following can ...
0
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1answer
33 views

Literature that demonstrates organisms have a competitive advantage in numbers

I'm studying two bird populations that are competing against each other for a resource: Population A and Population B. Population A is present in much higher numbers than Population B, and as a ...
8
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1answer
207 views

What sample sizes are ideal for carrying out Bayesian Skyline Plots?

I am interested in creating Bayesian Skyline Plots to look at demographic changes in certain population groups. However, these populations have very little within population variation. Around 5 ...
4
votes
1answer
97 views

Fixation rate at neutral loci

It is a classical result that the expected time for a neutral mutation to occur and to get fixed is $2 N \mu \frac{1}{2N} = \mu$, where $N$ is the population size and $\mu$ is the neutral mutation ...
4
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2answers
214 views

What is called the “area size that an animal usually lives in”?

What is called the "area size that an animal usually lives in" or "needs for a normal life"? Is there any specific term?
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0answers
35 views

Why does death exist? [duplicate]

The biological purpose of an organism is to reproduce and as soon as reproductive age is passed, aging kicks in and eventually leads to death. (This is what I learned from a gerontologist.) But then, ...
2
votes
1answer
181 views

How do you convert mtDNA sequences in FASTA to FSTAT format?

I've got control region sequence data from a population of shark and I'm looking to convert this from FASTA to FSTAT in order to calculated the effective population size of females. The software I ...
3
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1answer
83 views

Mutation Rate in Multicellular Eukaryotes

I always hear people saying that the mutation rate is around $10^{-6}$ or $10^{-7}$. I don't even know if this number is the mutation rate of genes or of a single nucleotides and I actually (almost) ...
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0answers
71 views

How does the population fitness changes after a change in mutation rate

The mean population fitness as given by mutation load theory depends only on the genome-wide mutation rate ($U$). My question is: how many generations is needed to reach a new mutation load ...
8
votes
3answers
270 views

Evolution: One big population vs. many small populations

Let's say I want to evolve a bacterium that is resistant to an antibiotic. I want to do this by growing initially clonal populations of bacteria in presence of this antibiotic for a long time. I have ...
4
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1answer
169 views

Drake's Law. What is the genome-wide mutation rate and what are the estimates?

Drake's rule Drake's rule states that the genome-wide mutation rate is more or less constant across all species — from E.coli to the house sparrow. Data From what I think being Drake's original ...
7
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1answer
184 views

How many eukaryotes are there on Earth?

I have been reading: William B. Whitman, David C. Coleman, and William J. Wiebe, "Prokaryotes: The unseen majority", Proc. Natl. Acad. Sci. USA 95, pp. 6578–6583, June 1998. [Full Text] [PDF] ...
8
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0answers
93 views

How to define “Quasifixation” in continuous approximation of finite population?

Background Many models including the famous very first models derived by Sir Ronald Fisher in his early career, assume infinite population size. In an infinite population, an allele can rise in ...
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1answer
183 views

Interpretation of graph from evolutionary biology

I am studying evolutionary biology, and been presented with this graph: I am having some difficulties understand its meaning. For a start, why is time measured as a fraction of the population size? ...
3
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0answers
84 views

Understanding the meaning of $s$ and $t$ in a population genetics equation

Sewall Wright in this article (1937) at the end of page 313 gives the equation: $$\Delta q = (s+tq)q(1-q) \space\space\space\space\space\space\space\space\space(1)$$ This equation is an ...
4
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360 views

Mutation-Selection-Drift Equilibrium

mutation-selection-drift equilibrium is one of the most important concept of population genetics. I could easily find the calculations for mutation-secltion equilibrium and for mutation-drift ...
1
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1answer
155 views

Does a top heavy population grow, decline or stabilize?

Imagine a population that has a larger proportion of older individuals than younger ones, what could possible happen to it in the future? I am guessing that if the older individuals reproduce, the ...
3
votes
1answer
236 views

Software to calculate Fst from sequence data

I'm looking for a software to calculate Fst from 3 loci DNA data of individuals from a metapopulation. I don't have any prior on the population structure (have no idea of the number of subpopulations ...
6
votes
1answer
106 views

Can we really 'discover' 85% of mammalian viruses?

This virology [blog] discusses estimates of the number of mammalian viruses and the costs of 'discovering' 85% of them. My question is whether this is not a forlorn hope. The ".632 rule" in ...
2
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1answer
56 views

$F_{ST}$ when considering a multi-allelic locus

Sewall Wright defined the $F_{ST}$ in a metapopulation as being: $$F_{ST} = \frac{\text{Var}(p)}{\bar p (1-\bar p)}$$ , where $p$ is a vector of frequencies of a given allele and $\bar p$ and ...
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0answers
53 views

$F_{ST}$ and the genetic variance in metapopulations

From this video (21'15''), the speaker gives the following formulae in order to calculate the between and among populations genetic variance from the $F_{ST}$: $$V_{Among Pop} = 2 F_{ST}V_G$$ ...
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1answer
189 views

Various Genetic Loads and their Definitions

In population genetics, we talk about several types of genetic loads (also called just loads). I am asking for a exhaustive list and a short definition. Here are for example some genetic loads that ...