Questions relating to the binding of proteins to each other and other molecules.

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2
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1answer
58 views

How is protein cavity centre related to binding?

I am confused and I have the following questions: 1. What are (in the context of article below) protein cavity centres? 2. How are they related to binding? (Automated identification of protein-ligand ...
3
votes
0answers
79 views

Experimental techniques to measure protein-protein and protein-ligand structure and dynamics

We would like to compare our simulation results with experimentation. When one wants to follow experimentally the dynamics (and possibly structure) of protein-protein or protein-ligand docking ...
1
vote
0answers
37 views

Does antibody staining / immunolabeling block or inhibit protein function?

In dissociated cells, does staining them with an antibody block the protein's function? How can one assess if the protein is still functional?
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0answers
17 views

How to get chemical structures in PDB format?

I am about to embark on the final step of a research project that involves molecular docking. Specifically, I am planning on docking an alpha(2,6)-linked sialic acid glycan to the influenza ...