Tagged Questions

Set of methods to visualize certain properties (structure, gene expression, potential changes, etc.) of organisms or single cells.

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1answer
21 views

Does methanol fixation deform cultured cells?

I use methanol fixation (@ -20⁰C for 10 minutes) when performing immunofluorescence assays on cultured cells. Generally speaking, this results in very good antibody staining. However, the cells tend ...
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0answers
72 views

Hoechst red and blue spectra - what does the red emission tell us?

I understand that the blue spectrum is emitted when Hoechst 33342 binds to nuclear DNA. But what exactly is the red spectrum telling us? I read that the red spectrum can be indicative of apoptosis, ...
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0answers
77 views

How are new staining protocols designed for microscopy?

How are new staining protocols designed for microscopy? Is it manual work or does it rely on computer simulations? Say for example I thought the H&E staining does not bring enough contrast. How ...
5
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1answer
282 views

How long does it take to stain cells?

I'm never going to run these type of experiments but I do need to have a good idea of their timescale. After I fix my cells, if I stained my cells with histology stains like DAPI, Fluorescein, and ...
6
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1answer
175 views

What's a good reference for choosing histological staining chemicals?

It's often difficult to find the appropriate or best stain to use when I want to examine a new type of tissue. I think that's partly because many histological techniques were developed a long time ...
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2answers
1k views

Alternatives to ethidium bromide for staining small nucleic acids?

While ethidium bromide works well for staining larger single-stranded RNA or double-stranded DNA molecules, it doesn't stain smaller nucleic acids very well. I observed that at around 20 bases and ...
10
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1answer
132 views

Are these Gram stain substitutions acceptable?

In the context of a Gram stain on a blood smear: Are the following acceptable substitutions and/or what differences could arise by substituting them? Using methylene blue instead of crystal violet ...
3
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1answer
72 views

Is there a photobleaching-resistant, cell-permeant viability stain in the far red part of the spectrum?

I am looking for a live-cell–impermeable dye for viability. (The cells cannot be permeabilized and fixed in this experiment.) I would prefer with excitation and emission spectra similar to Cy5, but I ...
7
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1answer
364 views

To understand why satellite cells are genetically inactive in Barr body

DAPI is used as a stain for DNA heterochromatic and euchromatic regions. The Barr body is heterochromatic. In the slide of a normal human female cheek's somatic cells, there is apparently no other ...
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2answers
2k views

What is the Giemsa staining of chromosomes?

I got the question in my exam and wrote the following and I do not understand what is wrong in it: Giemsa staining is a staining method to stain particularly malaria and other parasital diseases. ...
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2answers
83 views

Recommended applications for commercial antibodies

Commercial suppliers of primary antibodies for given protein targets typically list recommended applications, for which the antibody has presumably been shown to work. I am usually looking to use them ...
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2answers
1k views

What conditions should I use for Gel Red staining?

What are the optimal staining conditions when using Gel Red? So far, since we have started using it, the gels ran in our lab have been of very poor quality. The bands are very blurred and often ...
11
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1answer
202 views

What histological stain can I use for beta-keratin?

I'm trying to find a histochemical stain for beta-keratin, the type found in Reptilia which is organized in beta-sheets. It's different than alpha-keratin which is found in mammalian skin, hair, ...