3
votes
0answers
75 views

What is the name of this bird?

Does anyone know the name of the bird in the pictures? It was found in the south of Spain in the month of June. (it is certainly neither a house sparrow nor a swallow nor a robin). Thanks for the ...
3
votes
0answers
23 views

What is the meaning of conservation site in miRNA-mRNA pairing context?

I am not biologist and just work in Bioinformatics field. Does anyone know what is the meaning of conservation in the context of miRNAs and their pairings to mRNAs? Example: Each of these duplexes ...
3
votes
0answers
14 views

Why is the administration of exogenous Anti-D not harmful to the foetus?

Haemolytic disease of the newborn can result from Rhesus incompatibility in utero. In this disease a Rh-ve mother becomes exposed to the antigens of a Rh+ve foetus by fetomaternal haemorrhage causing ...
3
votes
1answer
58 views

Does learning increase the number of neurons in the brain?

I am attempting to understand neurogenesis related to learning. Does learning increase the number of neurons in the human brain? What would be some good scientific publications to read?
3
votes
0answers
35 views

How to understand relatedness in an infinite island model?

My understanding is that the relatedness coefficient in kin selection models measures positive assortment. That is, altruism is more likely to evolve if altruists tend to interact with other ...
3
votes
1answer
33 views

What is the relationship between W, X, Y and P, M retinal ganglion cells?

In Guyton and Hall Textbook of Medical Physiology (12e) the retinal ganglion cells are classified into W, X, and Y types. However in Gray's Anatomy (40e) they are classified into Midget and Parasol ...
3
votes
1answer
41 views

Math behind the Genetic Relationship Matrix

The genetic relationship matrix (GRM) can estimate the genetic relationship between two individuals (j and k) over m SNPs and i representing a specific SNP. What I dont understand from their ...
3
votes
0answers
25 views

How stable is linear DNA transfected in eukaryotic cells?

I would like to know, with references from the literature, what is the half life of a linear dsDNA transfected in a mammalian cells. For example, if I transfect human cells with a PCR product ...
3
votes
0answers
28 views

Expected reproduction rate of a dandelion and/or fern

I am working a basic mathematical/computer simulation of an ecosystem, and I need to know the birth rate of each organism in my simulation. However, I could not find any data for how often a small, ...
3
votes
0answers
14 views

Gene silencing: relative or absolute number of methylated CpG sites?

CpG content varies a lot across the human genome. What does determine a promoter to be silenced through DNA methylation: the fraction of CpG sites that are methylated or the total number of methylated ...
3
votes
0answers
30 views

Can I leave BL21(DE3) cells in room temperature?

I am preparing competent cells, and I finished inoculating a single colony in SOB. It has been incubating at 37 degrees Celsius for almost 16 hours since, and it's getting very late where I live. I ...
3
votes
0answers
32 views

Mating types in fungi (and somatogamy)

I would have some related questions about the mating types of fungi. Does a single spore generate a mycelium possessing only one mating type? If it does not in general, do Ascomycota and ...
3
votes
0answers
27 views

What would the blood work look like for someone on a very high protein diet? [closed]

What will blood test results look like for someone on a very high protein diet consuming 1-2g of protein per pound of bodyweight per day? Is it healthy to maintain such a diet?
3
votes
0answers
43 views

When and How do pacemaker cells develop during the cell aggregation process of Dictyostelium discoideum?

I was reading a paper by Tang & Othmer about oscillations and waves in Dictyostelium discoideum. Under certain condition like starvation period in the life cycle of a Dictyostelium discoideum ...
3
votes
0answers
74 views

Do DNA supply houses maintain a watch list for dangerous oligos (Anthrax, Smallpox, etc.)?

The recent work by DeLoache, et al. on a synthetic opiate-precursor production pathway in yeast has generated a lot of scare stories in the media about people homebrewing heroin as easily as they ...
3
votes
0answers
29 views

Pits and Pores in Vascular Tissue

What purpose is served by the pits and pores in xylem and phloem cells? I cant find what purpose that these components serve in the vascular tissues in plants
3
votes
0answers
29 views

Infrared emitting diode eye safety

I'm thinking of creating my own laser tag system and am a bit concerned about the eye safety aspect. Most of the homebrew system I've seen use the TSAL 6100 ...
3
votes
0answers
69 views

E. coli not growing in liquid medium

We are regularly doing bacterial transformation and subculture from plate to liquid media to extract DNA. This usually goes very well and is straightforward, but occasionally, the colonies that grew ...
3
votes
0answers
45 views

Neural coupling between Pinsky-Rinzel (reduced Traub) neuron with a Wang-Buzsaki neuron?

I have read two papers related to modeling neurons. The first one is the paper by Pinsky and Rinzel and the second one by Wang and Buzsaki. The first mentioned neuron model is a excitatory neuron ...
3
votes
0answers
39 views

Is the number of stamens always 9 for geranium?

We are studing in class the reproduction of plants. We start the lesson by observing some components of flowers, it was the GΓ©ranium. First of all we start counting the number of sepals , petals and ...
3
votes
0answers
25 views

Multiplex PCR, shorter amplicon inhibiting longer amplicon?

I want to run multiplex PCRs for my genotyping, with a primer pair targeting my construct and a primer pair targeting some housekeeping gene (sort of a built-in control). I designed the control ...
3
votes
0answers
20 views

Generate T2/T1 Phage Resistant E Coli

I would like to generate T2/T1 phage resistant Stbl3 E Coli to use in virus production. Is there a plasmid somebody has used that confers resistance, or is this done another way?
3
votes
0answers
29 views

From where is the pollen kit material secreted?

From where is the pollen kit material secreted? I think it the tapetum would be a good candidate, since it is provides nutrition to the pollen grains.
3
votes
2answers
90 views

Before I move my arm the brain sends signals - what causes the brain to send signals? [closed]

Please tell me what causes the brain to send signals, how does the brain send signals? can you tell me what happens between the point when you make an intention to pick up a glass of water, and ...
3
votes
0answers
50 views

Is there any biological support for the concept of “chakras”? [closed]

Is there any support in modern biology for the ancient concept of "Chakras"? I've seen the concept of 7 chakras linked to the major endocrine glands in the human body (pineal,thyroid, adrenal, ...
3
votes
0answers
24 views

How can I create R8 (homopolymer repeat) filter without using illumina pipeline?

illumina instruments have built-in -or online- analysis software for variant analysis (CASAVA). This software can filter out the false positive variants near the homopolymer repeats (AAAAAAAA) and ...
3
votes
1answer
39 views

Energy transformations in chemiosmosis and ATP synthase

In terms of energy, how does chemiosmosis drive ATP synthase? How does electrical energy turn into mechanical energy and then into chemical energy? Would the movement of $H^+$ be considered passive ...
3
votes
0answers
20 views

Why do flagella form a bundle only when they rotate counterclockwise during chemotaxis?

During Chemotaxis in bacteria with flagella, the flagellar rotation dictates how the cell moves. If the flagella rotate counterclockwise, then they form a bundle at one end of the cell (---O) and ...
3
votes
0answers
40 views

Y Chromosome in Ovary Cancer Data

I have been analyzing TCGA Ovary Cancer data. In Somatic Mutation data, there is data of mutations in all the chromosomes (1-22 and X), but amazingly, I have found one (just one) row of Y Chromosome ...
3
votes
0answers
17 views

Is emergence connected to nature's transition between fractal regimes at different size scales?

A fractal algorithm like Mandelbrot is self-similar in all size scales. This is not the case in nature. A tree is fractal in the sense that each branch is similar to the tree as a whole. But that is ...
3
votes
0answers
63 views

Current Trend in Evolution of Human Intelligence

Up front, I am specifically not interested in philosophical or ethical considerations re Eugenics and related concepts. In an effort to receive a concise answer I'll post a narrowly defined question ...
3
votes
0answers
19 views

Is there a cellular mechanism that detects Ribosomal damage?

What kinds of options, if any, do cells (Eukary and Prokary) have for detecting, and repairing damage in Ribosomes (of all types)? I am curious as to what happens when a cell sustains damage of some ...
3
votes
0answers
26 views

Blood as newtonian flow and Poiseuille law [closed]

For a prep exam: A healtly pacient has a carotid with the following characteristics: intern ratio: 𝑅= 2.8 mm, 𝑃2 = 89 π‘šπ‘šπ»π‘”, 𝑃1 = 90 π‘šπ‘šπ»π‘”, πœ‡blood = 3.5 cp, 𝐿=10.0 cm. Using the ...
3
votes
2answers
58 views

Genetic Imprinting and Cell differentiation

It does not seem possible that these two processes can coexist: 1) Genetic imprinting is the phenomenon where genes are expressed differently depending on the parent of origin: 1a. Methylated ...
3
votes
0answers
30 views

What percentage of cells in the human body are infected during a non-fatal viral infection?

I understand that this would be a very rough estimate, but approximately how many cells in the human body are infected during an average non-fatal viral infection before the infection is eliminated by ...
3
votes
0answers
29 views

Why do naked mole rats live in colonies with a queen?

What was the evolutionary advantage in having queens? Is it because the ones that had queen like tendencies in the new environment had kids that cooperated better giving higher chance of survival of ...
3
votes
0answers
27 views

Will a store bought cabbage kill my Pieris brassicaes?

About 4 days ago I found a large amount of caterpillars (Pieris brassicae) in my radishes, I took them aside for seeing how they grow and I am out of radishes to give them. I bought a cabbage in the ...
3
votes
0answers
27 views

How to quantify the Abundance of a particular gene in Bacteria and Archaea?

For 16s rDNA metagenomic analysis, do I need to do the following steps? DNA extraction-> Purification-> PCR amplification-> Clone -> Pick every single colony-> PCR amplify -> Sequence -> ...
3
votes
0answers
61 views

Can't resolve protein with native PAGE

This is a native gel. Let's call the left 2 lanes protein A and the right 2 lanes protein B. B is the same as A except it has a FLAG tag. They are both homotetramers of about 65 kDa. After ...
3
votes
0answers
66 views

Are there any de-novo genome assembly programs for HADOOP?

I have access to a small (approx 20 nodes) cluster that has HADOOP running on it, and I need to do some de-novo genome assembly. I'd like to ask is anyone knows of any program that can do this on a ...
3
votes
0answers
26 views

Is it possible to isolate and analyse intermediates of protein folding?

I would like to know if there is an assay which could allow us to analyse a protein before it has assumed its 3D functional form. While studying structural biology, I only came to know the forces that ...
3
votes
0answers
55 views

How to explain Genome, Genes, RNA and protein in one figure to non-biologist?

I have a presentation to do where non-biologist are attending. In order to introduce a little bit my work I have to do a quick summary on genomes. So what is a genome, a gene, an mRNA and a protein. ...
3
votes
0answers
54 views

Degree of dosage compensation in Drosophila melanogaster

In this paper the authors state that the dosage compensation seen in Drosophila is approximately twofold, but they do not provide any source or numbers (as far as I can see) for this. What is the mean ...
3
votes
0answers
60 views

How we share pain?

When somebody else tells me about his or her itching or pain in some specific body part I sometimes begin to feel similar feelings. I can think of about three explanations: I feel pain all over my ...
3
votes
0answers
25 views

Protein-Bound Drugs in Kwashiorkor

Kwashiorkor is characterised by decreased serum protein (including serum albumin) due to poor dietary protein intake. What is the effect of this lowered serum protein on highly-protein-bound drugs? ...
3
votes
0answers
23 views

Procedure for doing western blot [closed]

I am writing a step by step guide for doing a western blot for a class. It is intended for any one with basic Biology lab skills. I am hoping people will review my draft and give feedback on how to ...
3
votes
0answers
20 views

How to differentiate between similar looking carps efficiently?

Carps look almost the same (e.g - Rohu, Catla). So, is there a specific distinguishing set of characteristics to help determine their species just by looking at them from afar (or maybe in some other ...
3
votes
0answers
38 views

Normal ECG/EKG Measurement?

I'm getting started using ECG using a 3 lead system by iWorx. I have place the leads on my two wrists and the ground on my ankle and have recorded some data into the provided LabScribe 3 software ...
3
votes
0answers
46 views

Human leukocytes (re)circulation/migration in homeostatic state

One can easily find information on the topic of leukocytes trafficking between vessels and peripheral tissues during inflammation. But what happens during normal states when there is no pathology? ...
3
votes
0answers
88 views

How close to Earth's core can organisms live?

We don't to know much about organisms living deep below the Earth's crust. Recently a team led by S. Giovanni discovered some microbes 300 m below the ocean floor. The microbes were found to be a ...

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