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Nov 22 |
comment |
How can I compare rates of evolution for two sets of proteins? @terdon: if you want to compute ka/ks ratios, you need to look at the nucleotide sequences, no? |
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Nov 22 |
comment |
How can I compare rates of evolution for two sets of proteins? The eggNOG database also contains alignments for protein families, but these are on the amino acid level. So you would still somehow have to go back to a nucleotide alignment, which I'm not quite sure how to do. :-/ Might be a good question to ask on BioStar with its larger bioinf audience. |
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Nov 22 |
comment |
How can I compare rates of evolution for two sets of proteins? are you working on species that have already been sequenced (for which you might info in databases), or do you have novel sequencing data? |
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Nov 20 |
answered | How to get smallest subtree containing a set of nodes from BioPhylo? |
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Nov 20 |
comment |
Why do living organisms replicate itself or procreate Yes, reproduction is part of the definition of life. However, this doesn't mean that a sterile animal doesn't live. |
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Nov 20 |
answered | Why do living organisms replicate itself or procreate |
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Nov 20 |
comment |
Multiple sequence alignment - how to align everything to 1 gene sequence? Which kind of result do you want to have? One alignment with three sequences, or two pair-wise alignments? If the former, what would you do if one of the 1000bp sequences causes a gap in the reference sequence? |
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Nov 19 |
reviewed | Approve suggested edit on What mechanisms tell temperate trees when to drop leaves? |
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Nov 19 |
reviewed | Approve suggested edit on What is the armpit hair for? |
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Nov 12 |
reviewed | Leave Open Why glycoproteins are better than non-glycoproteins in fulfilling biological tasks? |
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Nov 9 |
reviewed | Approve suggested edit on Death because of distilled water consumption |
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Nov 6 |
revised |
How did giraffes develop their rete mirabile failsafe? grammar, pre-existing rete mirabile |
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Oct 23 |
answered | Are there genes in humans from the common ancestor of all organisms? |
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Oct 22 |
revised |
Parse PDB using DSR-PDB Library edited tags |
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Oct 22 |
answered | Parse PDB using DSR-PDB Library |
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Oct 19 |
awarded | Custodian |
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Oct 19 |
reviewed | Close What happens to proteins when they absorb UV? |
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Oct 19 |
reviewed | Leave Closed If you had no water supply, is there enough free water in urine to sustain hydration? |
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Oct 19 |
reviewed | Reviewed What determines the colors and patterns of a clam shell? |
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Oct 19 |
comment |
What is the difference between orthologs, paralogs and homologs? Another pet peeve: homology is qualitative, not quantitative. So saying "significant homology" or "weak homology" is just wrong. |