1,473 reputation
317
bio website confounding.net
location United States
age 29
visits member for 1 year, 5 months
seen 15 hours ago
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Infectious disease epidemiology doctoral student with a focus on the intersection of mathematical models of disease transmission and observational study methods - how observational studies can be used to parameterize models, and how models can help develop targets for observational study. Has a known, documented fondness for enteric pathogens.

Fluent in SAS, good enough in R, barely hanging on in Python and C.

Also the author of Confounded by Confounding, a blog of public health, statistics, and life as a graduate student.

Currently trying to get the 'Public Health and Epidemiology' SE site off the ground: http://area51.stackexchange.com/proposals/34565/public-health-epidemiology

@EpiGrad


Mar
5
answered Is there a strong reason to be sceptical about the “cured HIV patient” being reported by mainstream media?
Mar
5
awarded  Custodian
Mar
5
reviewed Close Types of bacteria that will kill other types of bacteria?
Jan
15
awarded  Citizen Patrol
Jan
4
comment Is it possible that the recipient of a heart transplant would display some of the donor's personality traits, as if the heart has memories?
Alternately, they could be lied to about who their donor "was" to see if they manifest the memories and feelings of a 22 year old woman when their donor was actually a 35 year old man. Though I'm pretty sure an IRB would clobber that too.
Jan
3
comment Are there people cured of HIV by means of HAART?
@RoryM Indeed - a drug-based 'cure' for HIV is hardly a finding that would go under the radar.
Jan
3
answered Are there people cured of HIV by means of HAART?
Dec
20
answered Can paper/plastic currency serve as a medium for pathogens?
Dec
15
comment Vaccination and population dynamics of an epidemic
Yes, that's correct.
Dec
14
awarded  Yearling
Dec
11
comment Vaccination and population dynamics of an epidemic
You should ensure that the basic reproductive number for your Finland model is capable of sustaining an epidemic without vaccination.
Nov
22
awarded  Critic
Sep
17
awarded  Enlightened
Sep
17
awarded  Nice Answer
Sep
16
revised How is duration of efficacy estimated for vaccines?
Added information about viral evolution
Sep
16
comment How is duration of efficacy estimated for vaccines?
I've added some details to my answer. Your answer doesn't particularly conflict, its just asking about a subtly different process.
Aug
23
comment Does making yogurt from non-pasteurized milk work against possible disease bacteria?
@nico And you have not established that there are not. I pointed to a raw milk outbreak in Finland less than a month ago. There are others - your perception that they're aren't any doesn't necessarily mesh with reality. But foodborn outbreaks have to be very large to get much press, and raw milk products, even in Europe, aren't big enough to command that kind of attention. Also steak tartare has a very different pathogenic risk profile to hamburger meat ;)
Aug
23
comment Does making yogurt from non-pasteurized milk work against possible disease bacteria?
@nico As to the Slow Food page, while I have some issues with it overall, whether or not raw milk is good 'on the whole' was not the question - the question was whether raw milk yogurt would represent a new positive prevention for disease bacteria. I'd argue that the weight of the evidence for that is still firmly "no".
Aug
23
comment Does making yogurt from non-pasteurized milk work against possible disease bacteria?
@nico I very much doubt there's a genetic component - the time scale we're talking about between the divergence from raw milk to widespread pasteurization is quite short. Odds are that people in France simply accept the risk, in the same way people in the U.S. accept the risk of say, medium/medium-rare hamburger.
Aug
23
awarded  Commentator