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James
James
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What is a good multiple alignment of longlarge genome sequences (bacteria)when working with limited hardware?

I need to align bacterial genomes (namely mycobacteria, over 4 Mb in length), and my choice would have been either 'muscle' or 'clustalW'; however these algorithms are too memory demanding for such long sequences thus I can't run the multiple alignment on my machine.

Is there any other program that I could use to align multiple bacterial sequences?

Thanks

multiple alignment of long genome sequences (bacteria)

I need to align bacterial genomes (namely mycobacteria, over 4 Mb in length), and my choice would have been either 'muscle' or 'clustalW'; however these algorithms are too memory demanding for such long sequences thus I can't run the multiple alignment on my machine.

Is there any other program that I could use to align multiple bacterial sequences?

Thanks

What is a good multiple alignment of large genome sequences when working with limited hardware?

I need to align bacterial genomes (namely mycobacteria, over 4 Mb in length), and my choice would have been either 'muscle' or 'clustalW'; however these algorithms are too memory demanding for such long sequences thus I can't run the multiple alignment on my machine.

Is there any other program that I could use to align multiple bacterial sequences?

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Gigiux
Gigiux
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multiple alignment of long genome sequences (bacteria)

I need to align bacterial genomes (namely mycobacteria, over 4 Mb in length), and my choice would have been either 'muscle' or 'clustalW'; however these algorithms are too memory demanding for such long sequences thus I can't run the multiple alignment on my machine.

Is there any other program that I could use to align multiple bacterial sequences?

Thanks