Do you have recommendations for a book that presents the different algorithm used in theoretical evolutionary biology?
I don't mean evolutionary or genetic algorithms (otherwise this question would not be a good fit for Biology.SE) but algorithms applied to evolutionary biology. I am not interested in statistical procedures and algorithms to reconstruct phylogenetic trees, to annotate DNA sequences or to find out synonymous changes by comparing sequences of closely related species. I am not interested in introductory book on programming.
I am interested to computational modeling applied population genetics, kin selection, game theory, population range expansion, simulating sexual reproduction, selection for different sex determination system, evolution for robustness/evolvability, evolution of codon usage, evolution of genetic code, evolution of cognition, evolution of multicellularity, …
I don't quite know if one book that encompass all these subjects exist. If not, I wold welcome suggestions of book that present the algorithmic used in some but not all of these subjects.
Searching a bit in amazon, I easily found tons of book but don't quite know if they fit my expectations. Below are some examples
Individual based modeling and ecology
Models and algorithm for genome evolution
modelling for field biologists
Practical computing for biologist
Genetic and evolutionary computation
Genetic algorithms+ data structures = evolution programs
Cellular Model: Mathematical and theoretical biology, Algorithm, Data structure, Bioinformatics, Computational biology, Artificial life, Computer simulation