Where can I find the metabolic network of the human erythrocyte (red blood cell), in SBML format? The red blood cell metabolic network is a model that's usually employed in the literature [see refs below] to demonstrate mathematical techniques of analysis of metabolic networks.
Despite this common use, I haven't been able to find a metabolic network of the human erythrocyte in SBML format, which is commonly employed for these networks (for example, in the BiGG database, http://bigg.ucsd.edu/) because it is easy to use with the COBRA package (http://opencobra.sourceforge.net/).
So, anyone can tell me where I can find an SBML model of the metabolic network of the human red blood cell?
References where the red blood cell metabolic network is used:
Wiback, S. J., Famili, I., Greenberg, H. J., & Palsson, B. Ø. (2004). Monte Carlo sampling can be used to determine the size and shape of the steady-state flux space. Journal of Theoretical Biology, 228, 437–447. doi:10.1016/j.jtbi.2004.02.006
Braunstein, A., Mulet, R., & Pagnani, A. (2008). Estimating the size of the solution space of metabolic networks. BMC Bioinformatics, 9, 240. doi:10.1186/1471-2105-9-240
Jamshidi, N., Edwards, J. S., Fahland, T., Church, G. M., & Palsson, B. Ø. (2001). Dynamic simulation of the human red blood cell metabolic network. Bioinformatics, 17(3), 286–287.
Kauffman, K. J., Pajerowski, J. D., Jamshidi, N., Palsson, B. Ø., & Edwards, J. S. (2002). Description and analysis of metabolic connectivity and dynamics in the human red blood cell. Biophysical Journal, 83(2), 646–662. doi:10.1016/S0006-3495(02)75198-9