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Are there any computational tools to predict the binding affinity to specific DNA motifs from protein domain sequence information?
asked Jun 1, 2012 at 11:47
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Those that come up from a Google search ("predict DNA binding from protein domain tool") seem pretty well suited to your question.
Depending on your computational/statistical know-how you might also find these papers relevant
answered Jun 1, 2012 at 15:15
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