I'm trying to produce a haplotype network and so have decided to use the software haploview. However I'm having some problems importing my sequences into the software.
I Have my sequences in a FASTA format but I can't find a way to convert this into a format that haploview accepts.
Does anyone have any ideas how I can get from a FASTA format file (e.g. >Az01|Female|Azores AGGATCT...) to a phased haplotype format (Az01 Azores 0 4 2 2)?