I have access to a small (approx 20 nodes) cluster that has HADOOP running on it, and I need to do some de-novo genome assembly. I'd like to ask is anyone knows of any program that can do this on a HADOOP cluster. Cloud based stuff is not an option right now, unfortunately, so I need something that I can deploy on our cluster locally. Thx in advance.

  • $\begingroup$ You can try CONTRAIL and CLOUDBRUSH... $\endgroup$ – saravanan selvam Nov 2 '15 at 14:55

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