I am searching E.coli whole genome expression data with different conditions, any suggestion is appreciated. Condition could be for example different growth temperature, different medias, etc. I have tried GEO but it only gives a list and one should read all pages and samples one by one to see which conditions were used.
There are some databases in which you can search for E.coli gene expression data:
- GenExpDB: E. coli Gene Expression Database
- Many Microbe Microarrays Database (M3D): A resource of microbial gene expression data
- Stanford MicroArray Database (use the search tool to find relevant organisms)
- Colombos (COLlection Of Microarrays for Bacterial OrganismS)
To find out about the purpose and the conditions of the experiments behind this data sets you will have to read the respective publications.