0
$\begingroup$

I have an dataset of fasta sequences. This proteins are not complete (My sequences have 700 nucleotides,while complete sequences have 1725 nucleotides)I would like to know if i can make an population genetic analysis from it(like TAJIMA-D test) and similars.

$\endgroup$
0
$\begingroup$

It very much depends upon what type of analysis you want to perform. For a Tajima's D, all you would need is a single nucleotide sequences in a sample of individuals, so yes you can. Whether or not the sequence came from a gene or any other sequence is not relevant to whether you can compute Tajima's D (although the type of sequence will likely affect the resulting D).

$\endgroup$

Your Answer

By clicking “Post Your Answer”, you agree to our terms of service, privacy policy and cookie policy

Not the answer you're looking for? Browse other questions tagged or ask your own question.