I need 16S rRNA and 5S rRNA (Gammaproteobacteria - E.coli) Secondary structure files in ct format.

I tried looking for them in different RNA databases, could not find one. Can someone tell me where to find such datasets?

Thanks in advance.

  • $\begingroup$ This site has secondary structure maps for rRNA from different organisms but they are just pictures. Not sure if it is helpful. $\endgroup$
    Apr 5 '19 at 12:18
  • $\begingroup$ Thanks. But I was looking for the secondary structure files in ct format. I found it in RNA STRAND v2.0, please check the answer below. $\endgroup$
    – User
    Apr 5 '19 at 13:24

RNA STRAND v2.0 - The RNA secondary STRucture and statistical ANalysis Database http://www.rnasoft.ca/strand/

16S rRNA: secondary structure file in ct format


5S rRNA: secondary structure file in ct format



Your Answer

By clicking “Post Your Answer”, you agree to our terms of service, privacy policy and cookie policy

Not the answer you're looking for? Browse other questions tagged or ask your own question.