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I'm a student currently looking at antibody responses against a viral target protein of interest.

I have my own, annotated PyMOL session of my protein and I also have .pdbs of crystallised antibody structures that bind to this protein and rougly know whereabouts it binds. I would like to know if it is possible to combine these two structures into a single session to observe or at least overlay the two structures together. Many thanks!

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    $\begingroup$ You might find a PyMol expert on this list. If not try SE Bioinformatics or even Chemistry. $\endgroup$ – David Jun 12 at 14:08
  • $\begingroup$ I don't think PyMOL has built-in functions for that; you might have to use a docking software like AutoDock. I'd also recommend asking on Bioinformatics SE as David suggested $\endgroup$ – another 'Homo sapien' Jun 13 at 15:32

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