Questions tagged [virology]

Virology deals with the study of viruses, infectious entities that require the machinery of a host cell to replicate.

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What are the secondary structure requirements for cell-penetrating peptides AKA protein transduction domains

Cell penetrating peptides. Cell penetrating peptides (CPPs) are a class of short amino acid sequences which are sufficient for crossing cell membranes and delivering themselves along with any ...
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189 views

What percentage of cells in the human body are infected during a non-fatal viral infection?

I understand that this would be a very rough estimate, but approximately how many cells in the human body are infected during an average non-fatal viral infection before the infection is eliminated by ...
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363 views

Virucides - Herbal and otherwise, for HHV6 type virus or any inner-cell virus

Does anyone know where I can find a reliable list of virucides (not anti-virus) that can be used by humans? This virucide must be able to affect viruses that are already inside the cells. St John's ...
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25 views

What virus properties affect their airborne contagiousness?

What properties of a virus affect it's ability to be transmitted by air? I assume it must be able to withstand different temperatures and be smallish in size? For example why is influenza very ...
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Do we know that PrEP actually prevents infection, rather than masking it?

Pre-exposure prophylactic treatment (PrEP) for HIV is commonly said to reduce infection rates by more than 75%. Similar treatments for already-infected patient treatments do not cure HIV, but reduce ...
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1answer
360 views

Body's response to second dengue attack

I have read in wikipedia that the first dengue virus infection is cleared by the body very easily. The second infection, however, is dangerous. How does body fight second infection, or does it has any ...
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How does taking drugs speed up the development of drug resistant or viruses?

First, here is what I know: Some infectious illnesses, such as HIV or Hepatitis B, can be treated with the help of some drugs. The problem is that the virus sometimes undergoes mutations which grant ...
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792 views

Can 3% hydrogen peroxide be used as effective disinfectant and antiseptic?

I was curious to see whether 3% hydrogen peroxide can be used as antimicrobial and virucidal product for daily use in home. There are several disinfecting products in the market claim that use of ...
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56 views

Should gene therapy safety protocol include isolation?

In the case of a gene therapy trial where viral vectors are used to deliver genes into mammalian cells, including humans, should biosafety and ethical protocols include isolation of the patient as a ...
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184 views

Are there examples of non-pathogenic RNA viruses?

There do seem to be some non-pathogenic DNA viruses, for example Foamy virus. Non-pathogenic viruses would be great to use for gene therapy applications, except DNA viruses incorporate themselves into ...
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99 views

Can HBV pseudotyped oncolytic viruses be used to treat hepatocellular carcinoma?

Chronic hepatitis B is the leading cause of hepatocellular carcinoma (HCC). Oncolytic virotherapy (OV) is an emerging tool to treat cancer. However, one challenge of OV is that our immune system may ...
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61 views

Mosquito vs Human: Swapping the roles

Is there a known mosquito-specific lethal (for some relevant species of mosquitos) virus that you could safely (for the humans) put into the blood of living humans? Is it technically possible to ...
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114 views

Do symptoms of common cold infections correlate with the infectious agent?

The common cold - in summary, an acute upper respiratory tract viral infection - is one of the most frequent viral infections in humans and can be caused by about 200 viral types [Eccles (2005)]. ...
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919 views

Can viruses replicate in a cell that's already dead?

Suppose a virus randomly lands on a cell that's just lying around. This cell may have just recently died, or died a while ago. This cell may also be part of tissue of a dead organism.* Does the virus ...
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25 views

Do all +ssRNA viruses have similar structures and life cycles?

Take HCV for example. HCV doesn't package any enzymes in it's virions. When it infects a cell, it first translates its RNA genome. It's RdRp is synthesized with other non-structural proteins. Then its ...
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296 views

HIV and open reading frames

In Wilk et al. 2001 I saw that HIV has 3 open reading frames. In the Watts et al. 2009, I noticed they mentioned HIV has 9 open reading frames. I don't understand this very well. e.g. ...
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1answer
88 views

How some virus are able to reach the CNS?

I know that the lymphocytic choriomeningitis virus (LCMV) could provoke meningitis and encephalitis when this virus reaches the brain. However, there are other viruses like Varicella (VSV), ...
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16 views

Can cell mediated immune response be transferred via blood transfusion

I read that human body can develop cell mediated immunity to viral infections and subsequently clear the virus. For example, people clear warts through cell mediated immune response against the wart ...
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1answer
45 views

Why is the ability of a virus to get crystallized considered as a “Non living feature of a virus”?

My book states that the fact that :"Viruses can be crystallized" is a proof of their "Non living character" Does that mean living things cannot be crystallized? If yes, why is that so?
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22 views

Species diversity in cheese and yoghurt?

There have been studies on the number of species on humans and in various other environments. I was wondering how many species including: viruses, bacteria, yeasts, and fungi inhabit ordinary farm ...
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1answer
55 views

Could bacteria and phages be found in tissues?

in the literature, there are several studies of the gut virome and microbiome, for instance Reyes et al. on Nature (https://www.nature.com/articles/nature09199?error=cookies_not_supported&code=...
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21 views

Learning industry skills for virology?

I am trying to learn more about virology for a tentative job I could be taking soon, as a quality control person in virology. However, I have not taken a formal virology course, nor any course work ...
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15 views

Infecting yeast with viruses

Is there any virus, either natural or engineered, known to infect yeast through mechanisms similar to phages/human viruses, that is, by horizontal contamination mediated by extracellular viral ...
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172 views

Virus plaque assay, pfu/ml calculation on plates with too little plaques formed

I am a student, so I hope it is okay to put this question here. I've done the virus plaque assay in a practical recently and have a few questions regarding the plaque count for pfu calculation. In ...
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24 views

Why do some viruses have only one serotype, but others have many?

Some viruses, like the virus that causes mumps, have only a single serotype, meaning that variants of the disease are immunologically identical. However, other viruses, like the influenza virus family,...
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488 views

largest and smallest gram positive, gram negative and fungal pathogens

As I stumbled through this question: A 16-year-old female patient presented to her family physician with a complaint of an abnormal vaginal discharge and pruritus (itching). The patient ...
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25 views

What is the difference between operator mutant and repressor mutant lambda viruses?

I wanted to know what the difference between the operator mutant and repressor mutant lambda bacteriophages is and how do they act on E. coli cells.
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28 views

How to estimate MOI for a complex cell type

I am currently confused about the estimation of multiplicity of infection (MOI), here is an example in a scientific article in figure 3b, they tested the virus, and get estimated MOI based on this: ...
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118 views

Are exosomes useful as a transfection or delivery mechanism in gene editing?

The use of viruses as transfection or delivery agents for gene editing (CRISPR/cas9, etc) is well known. However, one problem with using viruses to deliver DNA into cells is the possibility of ...
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44 views

Cat herpes and behavior

We have 2 cats, aptly named "Fatty" and "Tiny". "Fatty" is a 6 year old house cat that hasn't seen the outside world in years. "Tiny" is a cat we rescued about 45 days ago and she's roughly 2.5 ...
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37 views

What chemicals will kill P1 Phage but not E. coli?

I'm working with E. coli and P1 Phage. I'm wondering if there is some chemical agent that will kill or disable P1 but leave E. coli untouched? It is not enough to just prevent infection. It must ...
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33 views

Concerning Rabies can an animal feeding on rabid bat transmit right away?

Playful kitten found biting and toying with a dead bat. Lets say the kitten nips and plays rough with a human right after biting and toying with the bat. Will a potential rabies virus transmit from ...
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47 views

A Designer Virus

An article at Wikipedia describes color changes that viruses have produced in tulips (without any human intention). And another article (elsewhere on the web) describes viruses that were designed to ...
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34 views

Which viruses are fatal to E.Coli?

I am currently doing a bit of research into which viruses are specifically fatal to the E.Coli bacterium. Apart from the fact that this is merely interesting information for me, I would like to know ...
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73 views

How does sGP of Ebola virus help it to evade host humoral immunity?

During Ebola infection, the viruses secret a lot of sGP. What's its function? Since anti GP antibodies are effective at inhibiting Ebola infection, wouldn't sGP stimulate host immune system to produce ...
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68 views

Bacteriophage lysis in mammalian cells

I have read many articles on bacteriophages (like the lambda phage1) being used for transferring genes into mammalian cells, but none of them mention any sort of lysis of the cells even though in ...
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54 views

Barcode exchange between neighbouring cells

I am currently interested in equipping animal cells in a tissue with individual barcodes. These barcodes should get amplified in the cells (not to a cell degrading extent, of course), and also ...
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23 views

Example of a virus becoming symbiotic with an organism

The human gut has an indispensably beneficial ecosystem of bacteria. What are the examples of a virus that becomes symbiotic with an organism, or even incorporates beneficially into the genome of the ...
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1answer
44 views

flavivirus virus genome, methylated guanine

I'm looking at the sequence of a flavivirus virus genome (mRNA). Kindly see the link MH900227.1. How can I identify the Guanine nucleotide that is methylated in the capping process? Thanks,
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22 views

Which virus has the highest number of layers protecting it's genome?

For example, dengue virus has 3 layers: The outermost layer of envelope proteins Lipid bilayer Capsid shell
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23 views

Insight on HPV vaccine to prevent/control reactivation of latent infections in those already infected

Some women experience reactivation of HPV infection in their 50's due to weakened immune system and weakened immune memory. Is it outside the realm of possibility that giving the HPV vaccine to those ...
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23 views

In HIV-1, what produces Tat?

The Trans-activator of transcription (Tat) plays a crucial role in regulating the transcription process of HIV-1. But which state of the Long Terminal Repeat (LTR) produces Tat? Is it the "...
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Is there a known mutation of an insertion type that prevents being infected by a virus?

Recently there was big news about the mutation CCR5 delta 32, that prevents HIV from infecting white blood cells, that was a deletion type of a mutation. Do we know of an insertion type of mutation ...
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23 views

Which cells are prefered by the HIV virus to establish an infection?

We always read that HIV infects CD4 cells, macrophages, and dendritic cells. However, is it a common event for HIV to infect non-immune cells within a host? If not, why? And also if not, why are ...
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How did Smith et al 2004 deal with missing HI [Hemagglutination Inhibition assay] values and HI values <10?

In the scientific paper "Mapping the Antigenic and Genetic Evolution of Influenza Virus's" Supporting Material, Smith et al write about determining antigenic distance Dij. However, I don't understand ...
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Fastest viral cycle (in eukaryotes) and theoretical limits?

I could not find any comprehensive review about this; I'm interested in comparing the duration of viral cycles from the entry in the host cell to the release of a mature virion. In particular, I am ...
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Why do -ssRNA viruses need to do intermediate positive strand (antigenome) instead of just replicate it negative strands?

I was reading about RSV replication here https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3185921/, but i cannot understand what is the reason for making a antigenome instead of just replicate it negative ...