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Results tagged with structural-biology
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user 203
The study of the molecular structure of biological macromolecules and how that structure relates to their function.
3
votes
2
answers
829
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JMol "calculate HBONDS": which atom is the donor/acceptor?
JMol can be used to identify Hydrogen bonds in proteins by the script "calculate HBONDS". By outputting the state of the network, we can obtain a lisdt of H-bonds.
Here's one line from an example ou …
- 2,111
16
votes
2
answers
494
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Can two protein secondary structures "overlap" in the PDB?
I have a technical question regarding the syntax in Protein Data Bank files. In the protein with PDB# 1AE9 (pdb file), there are two lines in the .pdb file:
HELIX 4 4 MET A 255 ILE A 265 1 …
- 2,111