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1 vote

How do I identify the carbonyl atoms in a PDB file

Looking at the ATOM records for an Ala residue, as an example: ATOM 132 N ALA A 33 0.179 -33.349 1.978 1.00 18.93 N ATOM 133 CA ALA A 33 0.316 -32.425 0.863 1....
canadianer's user avatar
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3 votes

How is the "global pLDDT" score in the Protein Data Bank calculated?

pLDDT is a measure of confidence that ML models like AlphaFold provide for predictions of protein structures. The entries you are sorting here are not predictions, they are all experimental structures....
timeskull's user avatar
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