All Questions
3 questions
2
votes
1
answer
154
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How to retrieve logical expression (KO based) for reactions from KEGG?
Whether a module is complete or not can easily be checked by evaluating the Definition entry associated with the module; e.g. in module M00010, it is given by
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4
votes
2
answers
290
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Grouping OMIM disease codes
I have ~100 sets of genes, and each set includes between 2 and 70 genes. I'd like to perform an enrichment analysis on each of these sets to test if they're enriched for OMIM disease labels. However, ...
1
vote
1
answer
258
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BWA-MEM single strand or doublestrand alignment
In whole genome secondary analysis does BWA-MEM use a double stranded fasta reference or are reads aligned to only one, single stranded fasta reference?