All Questions
6 questions
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Help Finding Specific BlaZ Gene Type Sequences on Genbank
I am doing an undergraduate research project that involves blaZ gene typing for different strain types of Staphylococcus aureus bacteria; for reference, here are some of papers on this topic that ...
3
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1
answer
511
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What is meant by “genes at the trunk of the evolutionary tree”?
Recently I went through a paper about hepatocellular carcinoma in which they talked about trunk genes (p. 26, second paragraph):
Branching tumor evolution complicates efforts to implement
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- 209
3
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2
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692
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Is it possible to create a restriction map using python? [closed]
I have some fragments of DNA from single and double digests using three different restriction enzymes. I'm trying to construct a restriction map of a linear fragment of DNA. The map needs indicate the ...
1
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1
answer
258
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BWA-MEM single strand or doublestrand alignment
In whole genome secondary analysis does BWA-MEM use a double stranded fasta reference or are reads aligned to only one, single stranded fasta reference?
- 51
1
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1
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228
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How to interpret the simple sequence repeat (SSR) on the coding sequence, but not the related protein sequence?
I have predicted some SSR repeat on the gene of interest using SSRLocator program, which the result creates a question for me. Please consider the below sequence, which is part of gene sequence of ...
- 343
1
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1
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183
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What are genome wide functional linkages?
There are two types of interaction classifications used to describe Protein-protein interactions, namely physical and functional. Whilst physical interactions are obvious in nature and methodological ...
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